fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G64530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb010523 not found in 213aa AT5G64530.1 1st_1st 0.482191780 Ia
Sb029316 AHVCNKLELALEIWLV in 476/754 AT5G64530.1 not_1st 0.424657534 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G64530.1     ---------------MN---LPPGFRFFPTDEELVVHFLHRKASLLPCHPDVIPDLDLYH
Sb010523_Sorbi1 -----------MGGATN---LPPGFHFFPSDEDLIVHFLRRKVANLPCRPDIVPTILLHR
Sb029316_Sorbi1 LFQHPAAPHLAMGGASNSNLLPPGFHFFPSDEELVVHFLRRKASLLPCQPDIVPTVCMNH
                                *   *****:***:**:*:****:**.: ***:**::* : : :

AT5G64530.1     YDPWDLP---------------GKALGEGRQWYFYSRKTQERVTSNGYWGSMGMDEPIYT
Sb010523_Sorbi1 YDPWELNGLHYSQPSLYLLYMHGTALQAGNQWYFFSHAAQSRTSPNGYWNPVGADETV--
Sb029316_Sorbi1 YDPWELN---------------GKALGAGNQWYFFSHAKHSRVTPNGYWSSVCADETV--
                ****:*                *.**  *.****:*:  :.*.:.****..:  **.:  

AT5G64530.1     SSTHKKVGIKKYLTFYLGDS------QTNWIMQEYSLPDS----SSSSSRSSKRSSRAS-
Sb010523_Sorbi1 TSSGCIVGLKKTLIFCTGEP--FKGFKTNWIMHEYHLQDGGYNVSGSSTSSSSSSSRKSQ
Sb029316_Sorbi1 SSGGCSVGLKKTLVFSTGEPSESEGTETNWIMHEYHLLDGRKGISSSTTSTNSSS-----
                :*    **:** * *  *:.      :*****:** * *.    *.*:: :.. *     

AT5G64530.1     -SSSHKPDYSK-------------WVICRVYEQNCSEEE--DDDGTELSCLDEVFLSLDD
Sb010523_Sorbi1 RKRLH------------SSTESNNWVICRVFESSCGSQVSFHDEGTELSCLDEVFLSLDD
Sb029316_Sorbi1 -KKLHHPNTAKHLGQVTSGTSS-------AMRSTAGS----HQTGT-----GALFVQTRR
                 .  *                        . ......    .: **     . :*:.   

AT5G64530.1     LDEVSLP
Sb010523_Sorbi1 YDE----
Sb029316_Sorbi1 -------
BoxShade v3.31 C (beta, 970507) Output
AT5G64530.1     - - - - - - - - - - - - - - - M N - - - L P P G F R F F P T D E E L V V H F L H R K A S L L P C H P D V I P D L D L Y H
Sb010523_Sorbi1    - - - - - - - - - - - M G G A T N - - - L P P G F H F F P S D E D L I V H F L R R K V A N L P C R P D I V P T I L L H R
Sb029316_Sorbi1    L F Q H P A A P H L A M G G A S N S N L L P P G F H F F P S D E E L V V H F L R R K A S L L P C Q P D I V P T V C M N H
 
AT5G64530.1     Y D P W D L P - - - - - - - - - - - - - - - G K A L G E G R Q W Y F Y S R K T Q E R V T S N G Y W G S M G M D E P I Y T
Sb010523_Sorbi1    Y D P W E L N G L H Y S Q P S L Y L L Y M H G T A L Q A G N Q W Y F F S H A A Q S R T S P N G Y W N P V G A D E T V - -
Sb029316_Sorbi1    Y D P W E L N - - - - - - - - - - - - - - - G K A L G A G N Q W Y F F S H A K H S R V T P N G Y W S S V C A D E T V - -
 
AT5G64530.1     S S T H K K V G I K K Y L T F Y L G D S - - - - - - Q T N W I M Q E Y S L P D S - - - - S S S S S R S S K R S S R A S -
Sb010523_Sorbi1    T S S G C I V G L K K T L I F C T G E P - - F K G F K T N W I M H E Y H L Q D G G Y N V S G S S T S S S S S S S R K S Q
Sb029316_Sorbi1    S S G G C S V G L K K T L V F S T G E P S E S E G T E T N W I M H E Y H L L D G R K G I S S S T T S T N S S S - - - - -
 
AT5G64530.1     - S S S H K P D Y S K - - - - - - - - - - - - - W V I C R V Y E Q N C S E E E - - D D D G T E L S C L D E V F L S L D D
Sb010523_Sorbi1    R K R L H - - - - - - - - - - - - S S T E S N N W V I C R V F E S S C G S Q V S F H D E G T E L S C L D E V F L S L D D
Sb029316_Sorbi1    - K K L H H P N T A K H L G Q V T S G T S S - - - - - - - A M R S T A G S - - - - H Q T G T - - - - - G A L F V Q T R R
 
AT5G64530.1     L D E V S L P
Sb010523_Sorbi1    Y D E - - - -
Sb029316_Sorbi1    - - - - - - -
 
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