fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G64530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm020546 not found in 190aa AT5G64530.1 1st_1st 0.728767123 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G64530.1     -----MNLPPGFRFFPTDEELVVHFLHRKASLLPCHPDVIPDLDLYHYDPWDLPGKALGE
gm020546_Glyma0 MGDNNVNLPPGFRFYPTDEELVVHFLQRKANLLPCHPDVIPDLELYPYDPWELHGRALAE
                     :********:***********:***.************:** ****:* *:**.*

AT5G64530.1     GRQWYFYSRKTQERVTSNGYWGSMGMDEPIYTSSTHKKVGIKKYLTFYLGDS----QTNW
gm020546_Glyma0 GKQWYYYSRRTQNRVTSNGYWMPMGMEEPVISNSSNKRVGMKKYYVFHLGEAPDGNTTNW
                *:***:***:**:******** .***:**: :.*::*:**:*** .*:**::     ***

AT5G64530.1     IMQEYSLPDSSSSSSRSSKRSSRASSSSHKPDYSKWVICRVYEQNCSEEEDDDGTELSCL
gm020546_Glyma0 IMQEYRLLDSASSSISSRRRSQP------KPDHSKWVICRVYERD-NDEDDGDGTELSCL
                ***** * **:***  * :**.       ***:**********:: .:*:*.********

AT5G64530.1     DEVFLSLDDLDEVSLP-
gm020546_Glyma0 DEVFLSLDDLDEISLPN
                ************:***
BoxShade v3.31 C (beta, 970507) Output
AT5G64530.1     - - - - - M N L P P G F R F F P T D E E L V V H F L H R K A S L L P C H P D V I P D L D L Y H Y D P W D L P G K A L G E
gm020546_Glyma0    M G D N N V N L P P G F R F Y P T D E E L V V H F L Q R K A N L L P C H P D V I P D L E L Y P Y D P W E L H G R A L A E
 
AT5G64530.1     G R Q W Y F Y S R K T Q E R V T S N G Y W G S M G M D E P I Y T S S T H K K V G I K K Y L T F Y L G D S - - - - Q T N W
gm020546_Glyma0    G K Q W Y Y Y S R R T Q N R V T S N G Y W M P M G M E E P V I S N S S N K R V G M K K Y Y V F H L G E A P D G N T T N W
 
AT5G64530.1     I M Q E Y S L P D S S S S S S R S S K R S S R A S S S S H K P D Y S K W V I C R V Y E Q N C S E E E D D D G T E L S C L
gm020546_Glyma0    I M Q E Y R L L D S A S S S I S S R R R S Q P - - - - - - K P D H S K W V I C R V Y E R D - N D E D D G D G T E L S C L
 
AT5G64530.1     D E V F L S L D D L D E V S L P -
gm020546_Glyma0    D E V F L S L D D L D E I S L P N
 
0