fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G65230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031258 not found in 445aa AT1G34670.1 not_not 0.420608108 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G65230.1     --------------------------------MGRSPSSDETGLKKGPWLPEEDDKLINY
Sb031258_Sorbi1 EGASLASYPVVAIDRSIEIGPVQCQSRLRRAAMGRSPCCDENGLKKGPWTQEEDEKLLHY
                                                *****..**.*******  ***:**::*

AT5G65230.1     IHKHGHSSWSALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSAEEEETILNLHAVLGNK
Sb031258_Sorbi1 IQKNGHGSWRTLPRLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSVLGNK
                *:*:**.** :**:***************************** ***:***:**:*****

AT5G65230.1     WSMIASHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDDIFSSLSQLMSLSNLRG
Sb031258_Sorbi1 WSAIATHLPGRTDNEIKNFWNTHLKKRLIQMGFDPMTHRPRT-DFFAALPQLIALAALR-
                ** **:********************:***********:*** *:*::*.**::*: ** 

AT5G65230.1     LVDLQQQFPMEDQALLNLQTEMAKLQLFQYLLQPSPAPMSINNINPNILNL---------
Sb031258_Sorbi1 -----QHLQLGD------QQQAAKLQYLQSLLQSAATTISSSDTEAPALGLGAICCSPPQ
                     *:: : *      * : **** :* ***.:.:.:* .: :.  *.*         

AT5G65230.1     --LIKENSVTSNIDLGFL-----------SSHLQDFNNNN------LPS----LKTLDD-
Sb031258_Sorbi1 LTTTPLDSCTAPVSSSLLPCTFPEAAPPVSSEEDEANNHQQQQTAGLSSSYGGLGSADDV
                      :* *: :. .:*           **. :: **::      *.*    * : ** 

AT5G65230.1     --NHFSQNTSPIWLHEPPSLNQTMLPTHDPCAQSVDGFGSNQASSSHDQEVAVTDSVDWP
Sb031258_Sorbi1 FACHGGSSSSSL----PPLTD--LSDAHAGSLLQVDGSMRSATASSSFGGGSSCSPLPWP
                   * ...:*.:    **  :  :  :*  .  .***   . ::**     :  ..: **

AT5G65230.1     DHHLF---DDSMFPDISYQS
Sb031258_Sorbi1 E--LFFPDDDPFITDFL---
                :  **   **.::.*:
BoxShade v3.31 C (beta, 970507) Output
AT5G65230.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G R S P S S D E T G L K K G P W L P E E D D K L I N Y
Sb031258_Sorbi1    E G A S L A S Y P V V A I D R S I E I G P V Q C Q S R L R R A A M G R S P C C D E N G L K K G P W T Q E E D E K L L H Y
 
AT5G65230.1     I H K H G H S S W S A L P K L A G L N R C G K S C R L R W T N Y L R P D I K R G K F S A E E E E T I L N L H A V L G N K
Sb031258_Sorbi1    I Q K N G H G S W R T L P R L A G L N R C G K S C R L R W T N Y L R P D I K R G K F S Q E E E Q T I L H L H S V L G N K
 
AT5G65230.1     W S M I A S H L P G R T D N E I K N F W N T H L K K K L I Q M G F D P M T H Q P R T D D I F S S L S Q L M S L S N L R G
Sb031258_Sorbi1    W S A I A T H L P G R T D N E I K N F W N T H L K K R L I Q M G F D P M T H R P R T - D F F A A L P Q L I A L A A L R -
 
AT5G65230.1     L V D L Q Q Q F P M E D Q A L L N L Q T E M A K L Q L F Q Y L L Q P S P A P M S I N N I N P N I L N L - - - - - - - - -
Sb031258_Sorbi1    - - - - - Q H L Q L G D - - - - - - Q Q Q A A K L Q Y L Q S L L Q S A A T T I S S S D T E A P A L G L G A I C C S P P Q
 
AT5G65230.1     - - L I K E N S V T S N I D L G F L - - - - - - - - - - - S S H L Q D F N N N N - - - - - - L P S - - - - L K T L D D -
Sb031258_Sorbi1    L T T T P L D S C T A P V S S S L L P C T F P E A A P P V S S E E D E A N N H Q Q Q Q T A G L S S S Y G G L G S A D D V
 
AT5G65230.1     - - N H F S Q N T S P I W L H E P P S L N Q T M L P T H D P C A Q S V D G F G S N Q A S S S H D Q E V A V T D S V D W P
Sb031258_Sorbi1    F A C H G G S S S S S L - - - - P P L T D - - L S D A H A G S L L Q V D G S M R S A T A S S S F G G G S S C S P L P W P
 
AT5G65230.1     D H H L F - - - D D S M F P D I S Y Q S
Sb031258_Sorbi1    E - - L F F P D D D P F I T D F L - - -
 
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