fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G65230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm003821 not found in 313aa AT1G34670.1 1st_not 0.456081081 II
Gm000818 not found in 313aa AT5G65230.1 not_1st 0.445945945 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G65230.1     MGRSPSSDETGLKKGPWLPEEDDKLINYIHKHGHSSWSALPKLAGLNRCGKSCRLRWTNY
gm000818_Glyma0 MGRSPCCDEIGLKKGPWTPEEDQKLIDHIQKYGHASWRALPKLAGLNRCGKSCRLRWTNY
gm003821_Glyma0 MGRSPCCDEIGLKKGPWTPEEDQKLIDHIQKHGHASWRALPKLAGLNRCGKSCRLRWTNY
                *****..** ******* ****:***::*:*:**:** **********************

AT5G65230.1     LRPDIKRGKFSAEEEETILNLHAVLGNKWSMIASHLPGRTDNEIKNFWNTHLKKKLIQMG
gm000818_Glyma0 LRPDIKRGKFSQEEEQTILDLHAVLGNKWSAIASHLPGRTDNEIKNFWNTHLKKKLIQMG
gm003821_Glyma0 LRPDIKRGKFSQEEEQTILDLHAILGNKWSAIASHLPGRTDNEIKNFWNTHLKKKLIQMG
                *********** ***:***:***:****** *****************************

AT5G65230.1     FDPMTHQPRTDDIFSSLSQLMSLSNLRGLVD-LQQQFPMEDQALLNLQTEMAKLQ-LFQY
gm000818_Glyma0 YDPMTHQPRIDDIFTGLSHLIALANLKEHLDHLHQHQPWE-QNLARLQ-ELARLQCLQQH
gm003821_Glyma0 YDPMTHQPRIDDIFTGLSHLIALANLKELLD-----QPLE-QNLARLQ-ELAKLQCLQQH
                :******** ****:.**:*::*:**:  :*      * * * * .** *:*:** * *:

AT5G65230.1     LLQPSPAPMSIN-NINPN-----ILNLLIKENSVTSNIDLGFLSSHLQDFNNN----NLP
gm000818_Glyma0 LLLLQA---SLT-DADPN-TIDSIINSTF-MNKDTINVSNDQFENIIMSSNGTMPFYHMP
gm003821_Glyma0 LLQPQA---SLNIDADPNYTINSTINSTFMMNKGTINVSNDQFENIIMSSNCTMPFSDMP
                **  ..   *:. : :**      :*  :  *. * *:. . :.. : . * .    .:*

AT5G65230.1     SLKTLDDNHFSQNTSPIWLHEPPSLNQTML-----------PTHDPCAQSVDGFGSNQAS
gm000818_Glyma0 ELK----------THP-CSYEAPISNKDMVQFSRGESYPNSPWLLSCSSTIPSSPSSLVA
gm003821_Glyma0 ELK----------TPPSCSYEAPLSNKDMIQLSQGEIYPDSPWLLSCSSTTPSSPSSLVA
                .**          * *   :*.*  *: *:           *   .*:.:  .  *. .:

AT5G65230.1     SSHDQEVAV-TDSVD----WPDHHLFDDSMFPDISYQS
gm000818_Glyma0 PPV-TEISL-TNVEDNCTIWPE-LLLEDPLFKMIS---
gm003821_Glyma0 PPV-TEVSLSTNVEDNCTIWPE-LLLEDPLFKMIS---
                ..   *::: *:  *    **:  *::*.:*  **
BoxShade v3.31 C (beta, 970507) Output
AT5G65230.1     M G R S P S S D E T G L K K G P W L P E E D D K L I N Y I H K H G H S S W S A L P K L A G L N R C G K S C R L R W T N Y
gm000818_Glyma0    M G R S P C C D E I G L K K G P W T P E E D Q K L I D H I Q K Y G H A S W R A L P K L A G L N R C G K S C R L R W T N Y
gm003821_Glyma0    M G R S P C C D E I G L K K G P W T P E E D Q K L I D H I Q K H G H A S W R A L P K L A G L N R C G K S C R L R W T N Y
 
AT5G65230.1     L R P D I K R G K F S A E E E E T I L N L H A V L G N K W S M I A S H L P G R T D N E I K N F W N T H L K K K L I Q M G
gm000818_Glyma0    L R P D I K R G K F S Q E E E Q T I L D L H A V L G N K W S A I A S H L P G R T D N E I K N F W N T H L K K K L I Q M G
gm003821_Glyma0    L R P D I K R G K F S Q E E E Q T I L D L H A I L G N K W S A I A S H L P G R T D N E I K N F W N T H L K K K L I Q M G
 
AT5G65230.1     F D P M T H Q P R T D D I F S S L S Q L M S L S N L R G L V D - L Q Q Q F P M E D Q A L L N L Q T E M A K L Q - L F Q Y
gm000818_Glyma0    Y D P M T H Q P R I D D I F T G L S H L I A L A N L K E H L D H L H Q H Q P W E - Q N L A R L Q - E L A R L Q C L Q Q H
gm003821_Glyma0    Y D P M T H Q P R I D D I F T G L S H L I A L A N L K E L L D - - - - - Q P L E - Q N L A R L Q - E L A K L Q C L Q Q H
 
AT5G65230.1     L L Q P S P A P M S I N - N I N P N - - - - - I L N L L I K E N S V T S N I D L G F L S S H L Q D F N N N - - - - N L P
gm000818_Glyma0    L L L L Q A - - - S L T - D A D P N - T I D S I I N S T F - M N K D T I N V S N D Q F E N I I M S S N G T M P F Y H M P
gm003821_Glyma0    L L Q P Q A - - - S L N I D A D P N Y T I N S T I N S T F M M N K G T I N V S N D Q F E N I I M S S N C T M P F S D M P
 
AT5G65230.1     S L K T L D D N H F S Q N T S P I W L H E P P S L N Q T M L - - - - - - - - - - - P T H D P C A Q S V D G F G S N Q A S
gm000818_Glyma0    E L K - - - - - - - - - - T H P - C S Y E A P I S N K D M V Q F S R G E S Y P N S P W L L S C S S T I P S S P S S L V A
gm003821_Glyma0    E L K - - - - - - - - - - T P P S C S Y E A P L S N K D M I Q L S Q G E I Y P D S P W L L S C S S T T P S S P S S L V A
 
AT5G65230.1     S S H D Q E V A V - T D S V D - - - - W P D H H L F D D S M F P D I S Y Q S
gm000818_Glyma0    P P V - T E I S L - T N V E D N C T I W P E - L L L E D P L F K M I S - - -
gm003821_Glyma0    P P V - T E V S L S T N V E D N C T I W P E - L L L E D P L F K M I S - - -
 
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