fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G65310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037298 not found in 328aa AT2G22430.1 1st_not 0.4375 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G65310.1     MKRSRGSSDSLSGFLPIRHSTTDKQISPRPTTTGFLYSGAGDYSQMFDALEDDGSLEDLG
pt037298_POPTR_ MKRSLGSSDSLGALMSICPSAEEH--SPRNHT--HVYS--REFQSMLDGLDEEGCVEEAG
                **** ******..::.*  *: ::  ***  *  .:**   ::..*:*.*:::*.:*: *

AT5G65310.1     GVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNR
pt037298_POPTR_ --GHVT----EKKRRLSGDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNR
                  **.:    ******. :**********::***********************:*****

AT5G65310.1     RARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLNVEGVKGIEENG
pt037298_POPTR_ RARWKTKQLERDYGVLKANYDSLKHNFDALQHDNEALLKEIRELKAKLN-------EENA
                *****************:*:*:**:* *:**:**::** :*:*******       ***.

AT5G65310.1     ALKAVEANQSVMANNEVLELSHRSPSPPPHIP------TDAPTSELAFEMF---------
pt037298_POPTR_ -----ESNVSV--KEEIILAESEDKMPEEDTPALLDSVAASETKELNYETFNNHSSINIG
                     *:* **  ::*::  . ..  *  . *      : : *.** :* *         

AT5G65310.1     ---SIFPRTENFRDDPADSSDSSAVLNEEYSPN-TVEAAGAV------------------
pt037298_POPTR_ LGASLFP---DFKDGSSD-SDSSAILNEDNSPNPAISSSGILQSQLMMSPPPSSSLRFNC
                   *:**   :*:*..:* *****:***: *** ::.::* :                  

AT5G65310.1     AATTVEMSTMGCF-------SQFVKMEEHEDLFSGEEACKLFADNE----QWYCSDQWNS
pt037298_POPTR_ SASSSSPSSMNCFQFSKSYQTQFVKLEEH-NFFSSEEACNFFSDEQPPSLPWYSSDQWN-
                :*:: . *:*.**       :****:*** ::**.****::*:*::     **.*****
BoxShade v3.31 C (beta, 970507) Output
AT5G65310.1     M K R S R G S S D S L S G F L P I R H S T T D K Q I S P R P T T T G F L Y S G A G D Y S Q M F D A L E D D G S L E D L G
pt037298_POPTR_    M K R S L G S S D S L G A L M S I C P S A E E H - - S P R N H T - - H V Y S - - R E F Q S M L D G L D E E G C V E E A G
 
AT5G65310.1     G V G H A S S T A A E K K R R L G V E Q V K A L E K N F E I D N K L E P E R K V K L A Q E L G L Q P R Q V A I W F Q N R
pt037298_POPTR_    - - G H V T - - - - E K K R R L S G D Q V K A L E K N F E V E N K L E P E R K V K L A Q E L G L Q P R Q V A V W F Q N R
 
AT5G65310.1     R A R W K T K Q L E R D Y G V L K S N F D A L K R N R D S L Q R D N D S L L G Q I K E L K A K L N V E G V K G I E E N G
pt037298_POPTR_    R A R W K T K Q L E R D Y G V L K A N Y D S L K H N F D A L Q H D N E A L L K E I R E L K A K L N - - - - - - - E E N A
 
AT5G65310.1     A L K A V E A N Q S V M A N N E V L E L S H R S P S P P P H I P - - - - - - T D A P T S E L A F E M F - - - - - - - - -
pt037298_POPTR_    - - - - - E S N V S V - - K E E I I L A E S E D K M P E E D T P A L L D S V A A S E T K E L N Y E T F N N H S S I N I G
 
AT5G65310.1     - - - S I F P R T E N F R D D P A D S S D S S A V L N E E Y S P N - T V E A A G A V - - - - - - - - - - - - - - - - - -
pt037298_POPTR_    L G A S L F P - - - D F K D G S S D - S D S S A I L N E D N S P N P A I S S S G I L Q S Q L M M S P P P S S S L R F N C
 
AT5G65310.1     A A T T V E M S T M G C F - - - - - - - S Q F V K M E E H E D L F S G E E A C K L F A D N E - - - - Q W Y C S D Q W N S
pt037298_POPTR_    S A S S S S P S S M N C F Q F S K S Y Q T Q F V K L E E H - N F F S S E E A C N F F S D E Q P P S L P W Y S S D Q W N -
 
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