fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G65410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp026083 not found in 339aa AT1G75240.1 1st_not 0.549152542 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G65410.1     MEFEDNNNNNDEEQEEDMNLHEEEEDDDAVYDSP---PLSRVLPKASTES----------
pp026083_Pp1s3_ MDLGTGREGTDPQQQQKSS-HQTQQQQQPQPLSPLPAPLPLLMPQPLAVSNFHSAPPPLQ
                *::  ..:..* :*::. . *: :::::.   **   **. ::*:. : *          

AT5G65410.1     ---------HETTGT-------TSTGGGGGF-----------------MVVHGGGGSR--
pp026083_Pp1s3_ QHHQHHQLHHEIPSSTKLKLLNTSSGNGGSVPSKGDHVGADQAREILRQAVQGAAAGNES
                         ** ..:       **:*.**..                  .*:*.....  

AT5G65410.1     ------------FRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNF
pp026083_Pp1s3_ ASTKPSNVKKGTVRYRECQKNHAASIGGHALDGCGEFMPGGEEGTVDALRCAACDCHRNF
                            .*:*** **:*..*****:********.* ***:***:****.*****

AT5G65410.1     HRKELP---------------------YFHHAPPQHQPPPPPPGFYRLPAPVSYRPPPSQ
pp026083_Pp1s3_ HRREVEGEVLCECKRKQKPGVQLGAAVITSQHPPGGTIPSTPMATLALP------PSAGV
                **:*:                         : **    *..* .   **      *... 

AT5G65410.1     APPLQLALPPPQRERSEDPMETSSAEAGGG----------IRKRHRTKFTAEQKERMLAL
pp026083_Pp1s3_ MTPLTMAALSTGGPTDSDEQDDGLGNSGGGMMMSMRSPSAIKKRFRTKFTNEQKDQMCAF
                 .** :*  ..    ..*  : . .::***          *:**.***** ***::* *:

AT5G65410.1     AERIGWRIQRQDDEVIQRFCQETGVPRQVLKVWLHNNKHTLGKSPSPLHHHQAPPPPPPQ
pp026083_Pp1s3_ AEKVGWRIQKHDEASVQEFCATAGIKRHVLKVWMHNNKHTMGKKPT--------------
                **::*****::*:  :*.**  :*: *:*****:******:**.*:              

AT5G65410.1     SSFHHEQDQP
pp026083_Pp1s3_ ----------
BoxShade v3.31 C (beta, 970507) Output
AT5G65410.1     M E F E D N N N N N D E E Q E E D M N L H E E E E D D D A V Y D S P - - - P L S R V L P K A S T E S - - - - - - - - - -
pp026083_Pp1s3_    M D L G T G R E G T D P Q Q Q Q K S S - H Q T Q Q Q Q Q P Q P L S P L P A P L P L L M P Q P L A V S N F H S A P P P L Q
 
AT5G65410.1     - - - - - - - - - H E T T G T - - - - - - - T S T G G G G G F - - - - - - - - - - - - - - - - - M V V H G G G G S R - -
pp026083_Pp1s3_    Q H H Q H H Q L H H E I P S S T K L K L L N T S S G N G G S V P S K G D H V G A D Q A R E I L R Q A V Q G A A A G N E S
 
AT5G65410.1     - - - - - - - - - - - - F R F R E C L K N Q A V N I G G H A V D G C G E F M P A G I E G T I D A L K C A A C G C H R N F
pp026083_Pp1s3_    A S T K P S N V K K G T V R Y R E C Q K N H A A S I G G H A L D G C G E F M P G G E E G T V D A L R C A A C D C H R N F
 
AT5G65410.1     H R K E L P - - - - - - - - - - - - - - - - - - - - - Y F H H A P P Q H Q P P P P P P G F Y R L P A P V S Y R P P P S Q
pp026083_Pp1s3_    H R R E V E G E V L C E C K R K Q K P G V Q L G A A V I T S Q H P P G G T I P S T P M A T L A L P - - - - - - P S A G V
 
AT5G65410.1     A P P L Q L A L P P P Q R E R S E D P M E T S S A E A G G G - - - - - - - - - - I R K R H R T K F T A E Q K E R M L A L
pp026083_Pp1s3_    M T P L T M A A L S T G G P T D S D E Q D D G L G N S G G G M M M S M R S P S A I K K R F R T K F T N E Q K D Q M C A F
 
AT5G65410.1     A E R I G W R I Q R Q D D E V I Q R F C Q E T G V P R Q V L K V W L H N N K H T L G K S P S P L H H H Q A P P P P P P Q
pp026083_Pp1s3_    A E K V G W R I Q K H D E A S V Q E F C A T A G I K R H V L K V W M H N N K H T M G K K P T - - - - - - - - - - - - - -
 
AT5G65410.1     S S F H H E Q D Q P
pp026083_Pp1s3_    - - - - - - - - - -
 
0