fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G65410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031548 not found in 621aa AT1G14440.2 1st_not 0.437288135 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G65410.1     -----MEFEDNNNNNDEEQEEDMNLHEEEEDDDAVYDSPPLSRVLPKASTESHETTGTTS
Sb031548_Sorbi1 LVGRSLQPQLRRRAPAGAPSGPAGLRERHAELAAV--RPLLLRV----------ANAVVA
                     :: : ...      .   .*:*.. :  **   * * **          :....:

AT5G65410.1     TGGGGGFMVVH----GGGGSRFRFRECLKNQAVNI-------------------------
Sb031548_Sorbi1 APRQGVLVVVHPHLEHAPLHAHLLAEALHRRVVQLLQPPPGLLRETQHAGLLLRRELGPE
                :   * ::***     .    . : *.*:.:.*::                         

AT5G65410.1     ---GGHAVDGCGEFMP----------AGIEG--TIDALKCAACGCHRNFHRKELPYFHHA
Sb031548_Sorbi1 PLPGRRAL-----LLPVRMSRRVVRVVGLRGRRAVVVLLLMVHGAQRHHHARR----RRG
                   * :*:     ::*          .*:.*  :: .*   . *.:*:.* :.    ::.

AT5G65410.1     PPQHQPPP---------------------PPPGFYRLPAPVSYRPPPSQAPPLQLALPPP
Sb031548_Sorbi1 QRRHQQPPVVVRRGQRAQRAQWMVVVVVVPVP--VQLPR-VAASAPTRRLLAVEVAVAPA
                  :** **                     * *   :**  *:  .*. :  .:::*:.*.

AT5G65410.1     QR--ERSEDPMETSSAEAGGGIRKRHRTKFTAEQKERMLALAERIGWRIQRQDDEVIQRF
Sb031548_Sorbi1 RRAPERVQRPFLARGHELAAPVRR-----------------APADGRRV------VLQAL
                :*  ** : *: : . * .. :*:                 *   * *:      *:* :

AT5G65410.1     -----------CQETGVPRQ--VLKVWLHN--NKHT------------------------
Sb031548_Sorbi1 AVPHPCSPASSCAAHGHHRQLPVLGLLRHHVRRRHVPAVRAMVMLLLVVPVVQPQVRRAS
                           *   *  **  ** :  *:  .:*.                        

AT5G65410.1     -----------LGKSPSPLHH----HQAPPPPPPQ-------SSFHHEQD----------
Sb031548_Sorbi1 AAAAGMHCHRQLALRPGKIHALSLTSSAAAAPVPRCNKSCCGCSEGLNQDGKEGASSCLV
                           *.  *. :*      .*...* *:       .*   :**          

AT5G65410.1     QP
Sb031548_Sorbi1 KP
                :*
BoxShade v3.31 C (beta, 970507) Output
AT5G65410.1     - - - - - M E F E D N N N N N D E E Q E E D M N L H E E E E D D D A V Y D S P P L S R V L P K A S T E S H E T T G T T S
Sb031548_Sorbi1    L V G R S L Q P Q L R R R A P A G A P S G P A G L R E R H A E L A A V - - R P L L L R V - - - - - - - - - - A N A V V A
 
AT5G65410.1     T G G G G G F M V V H - - - - G G G G S R F R F R E C L K N Q A V N I - - - - - - - - - - - - - - - - - - - - - - - - -
Sb031548_Sorbi1    A P R Q G V L V V V H P H L E H A P L H A H L L A E A L H R R V V Q L L Q P P P G L L R E T Q H A G L L L R R E L G P E
 
AT5G65410.1     - - - G G H A V D G C G E F M P - - - - - - - - - - A G I E G - - T I D A L K C A A C G C H R N F H R K E L P Y F H H A
Sb031548_Sorbi1    P L P G R R A L - - - - - L L P V R M S R R V V R V V G L R G R R A V V V L L L M V H G A Q R H H H A R R - - - - R R G
 
AT5G65410.1     P P Q H Q P P P - - - - - - - - - - - - - - - - - - - - - P P P G F Y R L P A P V S Y R P P P S Q A P P L Q L A L P P P
Sb031548_Sorbi1    Q R R H Q Q P P V V V R R G Q R A Q R A Q W M V V V V V V P V P - - V Q L P R - V A A S A P T R R L L A V E V A V A P A
 
AT5G65410.1     Q R - - E R S E D P M E T S S A E A G G G I R K R H R T K F T A E Q K E R M L A L A E R I G W R I Q R Q D D E V I Q R F
Sb031548_Sorbi1    R R A P E R V Q R P F L A R G H E L A A P V R R - - - - - - - - - - - - - - - - - A P A D G R R V - - - - - - V L Q A L
 
AT5G65410.1     - - - - - - - - - - - C Q E T G V P R Q - - V L K V W L H N - - N K H T - - - - - - - - - - - - - - - - - - - - - - - -
Sb031548_Sorbi1    A V P H P C S P A S S C A A H G H H R Q L P V L G L L R H H V R R R H V P A V R A M V M L L L V V P V V Q P Q V R R A S
 
AT5G65410.1     - - - - - - - - - - - L G K S P S P L H H - - - - H Q A P P P P P P Q - - - - - - - S S F H H E Q D - - - - - - - - - -
Sb031548_Sorbi1    A A A A G M H C H R Q L A L R P G K I H A L S L T S S A A A A P V P R C N K S C C G C S E G L N Q D G K E G A S S C L V
 
AT5G65410.1     Q P
Sb031548_Sorbi1    K P
 
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