fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G65410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb000501 not found in 234aa AT4G24660.1 not_not 0.4 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G65410.1     MEFEDNNNNNDEEQEEDMNLHEEEEDDDAVYDSPPLSRVLPKASTESHETTGTTSTGGGG
Sb000501_Sorbi1 ---------MDQQQ------HQER------------------------------------
                          *::*      *:*.                                    

AT5G65410.1     GFMVVHGGGGSRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNF
Sb000501_Sorbi1 ----------PREVYRECMRNHAAKLGTYASDGCCEYTPD--DGQPAAMLCAACGCHRNF
                          .*  :***::*:*.::* :* *** *: *   :*   *: **********

AT5G65410.1     HRKELPYFHHAPPQH-----------QPPP---PPPGFYRLPAPVSYRPPPSQAPPLQLA
Sb000501_Sorbi1 HRK--AFVDAAAGAHVGGGGGAHGAMLPSPGVSPGYGMHHMAITAA--------------
                ***  .:.. *.  *            *.*   *  *::::. ..:              

AT5G65410.1     LPPPQRERSEDPMETSSAEAGGGIRKRHRTKFTAEQKERMLALAERIGWRIQRQ------
Sb000501_Sorbi1 -----------GMGGGDAGGSGGSRRRTRTKFTEEQKERMARFAERLGWRMPKREPGRAP
                            *  ..* ..** *:* ***** ******  :***:***: ::      

AT5G65410.1     -DDEVIQRFCQETGVPRQVLKVWLHNNKHTLGKSPSPLHHHQAPPPP-------------
Sb000501_Sorbi1 GDDEV-GRFCREIGVTRQVFKVWMHNHKAGVGGSGGAGVGGAAQTSSSTTRGGGVGVVGA
                 ****  ***:* **.***:***:**:*  :* * ..     * ...             

AT5G65410.1     ----PPQSSFHHEQDQP--------
Sb000501_Sorbi1 GGSLSPAMGADVEDDEEVKGSEMCM
                    .*  . . *:*:
BoxShade v3.31 C (beta, 970507) Output
AT5G65410.1     M E F E D N N N N N D E E Q E E D M N L H E E E E D D D A V Y D S P P L S R V L P K A S T E S H E T T G T T S T G G G G
Sb000501_Sorbi1    - - - - - - - - - M D Q Q Q - - - - - - H Q E R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G65410.1     G F M V V H G G G G S R F R F R E C L K N Q A V N I G G H A V D G C G E F M P A G I E G T I D A L K C A A C G C H R N F
Sb000501_Sorbi1    - - - - - - - - - - P R E V Y R E C M R N H A A K L G T Y A S D G C C E Y T P D - - D G Q P A A M L C A A C G C H R N F
 
AT5G65410.1     H R K E L P Y F H H A P P Q H - - - - - - - - - - - Q P P P - - - P P P G F Y R L P A P V S Y R P P P S Q A P P L Q L A
Sb000501_Sorbi1    H R K - - A F V D A A A G A H V G G G G G A H G A M L P S P G V S P G Y G M H H M A I T A A - - - - - - - - - - - - - -
 
AT5G65410.1     L P P P Q R E R S E D P M E T S S A E A G G G I R K R H R T K F T A E Q K E R M L A L A E R I G W R I Q R Q - - - - - -
Sb000501_Sorbi1    - - - - - - - - - - - G M G G G D A G G S G G S R R R T R T K F T E E Q K E R M A R F A E R L G W R M P K R E P G R A P
 
AT5G65410.1     - D D E V I Q R F C Q E T G V P R Q V L K V W L H N N K H T L G K S P S P L H H H Q A P P P P - - - - - - - - - - - - -
Sb000501_Sorbi1    G D D E V - G R F C R E I G V T R Q V F K V W M H N H K A G V G G S G G A G V G G A A Q T S S S T T R G G G V G V V G A
 
AT5G65410.1     - - - - P P Q S S F H H E Q D Q P - - - - - - - -
Sb000501_Sorbi1    G G S L S P A M G A D V E D D E E V K G S E M C M
 
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