fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G65410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031548 not found in 621aa AT1G14440.2 1st_not 0.437288135 II
Sb000501 not found in 234aa AT4G24660.1 not_not 0.4 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G65410.1     MEFEDNNNNNDEEQEEDMNLHEEEEDDDAVYDSPPLSRVLPKASTESHETTGTTSTGGGG
Sb000501_Sorbi1 ---------MDQQQ------HQER------------------------------------
Sb031548_Sorbi1 -----LVGRSLQPQ---------------------LRRRAPAGAPS--------------
                           : *                                              

AT5G65410.1     GFMVVHGGGGSRFRFRE--CLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHR
Sb000501_Sorbi1 ----------PREVYRE--CMRNHAAKLGTYASDGCCEYTPD--DGQPAAMLCAACGCHR
Sb031548_Sorbi1 ------GPAGLRERHAELAAVRPLLLRVANAVVAA-----PR--QGVLVVVH--------
                           *  . *  .::    .:.  .  .     *   :*   .:         

AT5G65410.1     NFHRKELPYFHHAPPQH----------------------QPPP-----------------
Sb000501_Sorbi1 NFHRK--AFVDAAAGAHVGGGGGAH-----------GAMLPSPGV---------------
Sb031548_Sorbi1 -------PHLEHAP-LH------AHLLAEALHRRVVQLLQPPPGLLRETQHAGLLLRREL
                       .... *.  *                       *.*                 

AT5G65410.1     ---PPPGFYRLPAPVSYRPPPSQAPPLQ---------LALPPPQRERSEDPMETSSAEAG
Sb000501_Sorbi1 --SPGYGMHHMAITAA----------------------------------GMGGGDAGGS
Sb031548_Sorbi1 GPEPLPGRRALLLPVRMSRRVVRVVGLRGRRAVVVLLLMVHGAQRHHH--------ARRR
                   *  *   :  ..                                         *   

AT5G65410.1     GGIRKRHRTKFTAEQKERMLALAERIGWRI------------------------------
Sb000501_Sorbi1 GGSRRRTRTKFTEEQKERMARFAERLGWRM------------------------------
Sb031548_Sorbi1 RGQRRHQQPPVVVRRGQR----AQRAQWMVVVVVVPVPVQLPRVAASAPTRRLLAVEVAV
                 * *:: :. .. .: :*    *:*  * :                              

AT5G65410.1     --QRQ-------------------------DDEVI-------------QRFCQETGVPRQ
Sb000501_Sorbi1 --PKREPG------------------RAPGDDEV--------------GRFCREIGVTRQ
Sb031548_Sorbi1 APARRAPERVQRPFLARGHELAAPVRRAPADGRRVVLQALAVPHPCSPASSCAAHGHHRQ
                   ::                         *..                  *   *  **

AT5G65410.1     --VLKVWLHN--------------------------NKHTLGKSPSPLHHHQAPPPP---
Sb000501_Sorbi1 --VFKVWMHN--------------------------HKAGVGGSGGAGVGGAAQTSSS--
Sb031548_Sorbi1 LPVLGLLRHHVRRRHVPAVRAMVMLLLVVPVVQPQVRRASAAAAGMHCHRQLALRPGKIH
                  *: :  *:                          .:   . :        *  .    

AT5G65410.1     --------------------PPQSSFHHEQDQP-----------
Sb000501_Sorbi1 ----TTRGGGVGVVGAGGSLSPAMGADVEDDEEVKGSEMCM---
Sb031548_Sorbi1 ALSLTSSAAAAPVPRCNKSCCGCSEGLNQDGKE--GASSCLVKP
                                            ::.:
BoxShade v3.31 C (beta, 970507) Output
AT5G65410.1     M E F E D N N N N N D E E Q E E D M N L H E E E E D D D A V Y D S P P L S R V L P K A S T E S H E T T G T T S T G G G G
Sb000501_Sorbi1    - - - - - - - - - M D Q Q Q - - - - - - H Q E R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb031548_Sorbi1    - - - - - L V G R S L Q P Q - - - - - - - - - - - - - - - - - - - - - L R R R A P A G A P S - - - - - - - - - - - - - -
 
AT5G65410.1     G F M V V H G G G G S R F R F R E - - C L K N Q A V N I G G H A V D G C G E F M P A G I E G T I D A L K C A A C G C H R
Sb000501_Sorbi1    - - - - - - - - - - P R E V Y R E - - C M R N H A A K L G T Y A S D G C C E Y T P D - - D G Q P A A M L C A A C G C H R
Sb031548_Sorbi1    - - - - - - G P A G L R E R H A E L A A V R P L L L R V A N A V V A A - - - - - P R - - Q G V L V V V H - - - - - - - -
 
AT5G65410.1     N F H R K E L P Y F H H A P P Q H - - - - - - - - - - - - - - - - - - - - - - Q P P P - - - - - - - - - - - - - - - - -
Sb000501_Sorbi1    N F H R K - - A F V D A A A G A H V G G G G G A H - - - - - - - - - - - G A M L P S P G V - - - - - - - - - - - - - - -
Sb031548_Sorbi1    - - - - - - - P H L E H A P - L H - - - - - - A H L L A E A L H R R V V Q L L Q P P P G L L R E T Q H A G L L L R R E L
 
AT5G65410.1     - - - P P P G F Y R L P A P V S Y R P P P S Q A P P L Q - - - - - - - - - L A L P P P Q R E R S E D P M E T S S A E A G
Sb000501_Sorbi1    - - S P G Y G M H H M A I T A A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G M G G G D A G G S
Sb031548_Sorbi1    G P E P L P G R R A L L L P V R M S R R V V R V V G L R G R R A V V V L L L M V H G A Q R H H H - - - - - - - - A R R R
 
AT5G65410.1     G G I R K R H R T K F T A E Q K E R M L A L A E R I G W R I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb000501_Sorbi1    G G S R R R T R T K F T E E Q K E R M A R F A E R L G W R M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb031548_Sorbi1    R G Q R R H Q Q P P V V V R R G Q R - - - - A Q R A Q W M V V V V V V P V P V Q L P R V A A S A P T R R L L A V E V A V
 
AT5G65410.1     - - Q R Q - - - - - - - - - - - - - - - - - - - - - - - - - D D E V I - - - - - - - - - - - - - Q R F C Q E T G V P R Q
Sb000501_Sorbi1    - - P K R E P G - - - - - - - - - - - - - - - - - - R A P G D D E V - - - - - - - - - - - - - - G R F C R E I G V T R Q
Sb031548_Sorbi1    A P A R R A P E R V Q R P F L A R G H E L A A P V R R A P A D G R R V V L Q A L A V P H P C S P A S S C A A H G H H R Q
 
AT5G65410.1     - - V L K V W L H N - - - - - - - - - - - - - - - - - - - - - - - - - - N K H T L G K S P S P L H H H Q A P P P P - - -
Sb000501_Sorbi1    - - V F K V W M H N - - - - - - - - - - - - - - - - - - - - - - - - - - H K A G V G G S G G A G V G G A A Q T S S S - -
Sb031548_Sorbi1    L P V L G L L R H H V R R R H V P A V R A M V M L L L V V P V V Q P Q V R R A S A A A A G M H C H R Q L A L R P G K I H
 
AT5G65410.1     - - - - - - - - - - - - - - - - - - - - P P Q S S F H H E Q D Q P - - - - - - - - - - -
Sb000501_Sorbi1    - - - - T T R G G G V G V V G A G G S L S P A M G A D V E D D E E V K G S E M C M - - -
Sb031548_Sorbi1    A L S L T S S A A A A P V P R C N K S C C G C S E G L N Q D G K E - - G A S S C L V K P
 
0