fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G65590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt036553 not found in 344aa AT5G65590.1 1st_1st 0.357371794 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G65590.1     MSSHTNLPSPKPVPKPDHRISGTSQ---TKKPPSSSVAQDQQNLKCPRCNSPNTKFCYYN
pt036553_POPTR_ MVPPDNL-QEKQTSKDDNQSSSSSRKTATTRP-------QEQALKCPRCESPNTKFCYYN
                * .  ** . * ..* *:: *.:*:   *.:*       ::* ******:**********

AT5G65590.1     NYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKKSIKPNSSMNTLPSSSSSQRFFS
pt036553_POPTR_ NYSLTQPRHFCKTCRRYWTKGGALRSVPIGGGCRKNKK-IKSSSRL----SSDSKDSSGS
                ****:*******:******:*****.*********.** **..* :    **.*.:   *

AT5G65590.1     SIMEDSSKFFPPPTTMDFQLAGLSLNKMNDLQ--LLNN------------------QEVL
pt036553_POPTR_ SEIAGFSFFHGLSPAVDFNLGGLSFPRLNPSQNGLYNHFPSFGDISATSAAAATVTSPSF
                * : . * *.  ..::**:*.***: ::*  *  * *:                  .  :

AT5G65590.1     DLRPMMSSGRENTPVDVGSGLSLMGFGDFNNNHSPTGFTTA------GAS---DGNLASS
pt036553_POPTR_ TLDPSVSS--------TGS-CSLMGF-NYPLTSVASGFCGAIQENIGGASMNINTNLPSS
                 * * :**        .**  ***** ::  .  .:**  *      ***   : **.**

AT5G65590.1     IETLSCLNQDLHWRLQQQRMAMLFG---NSKEETVV--------VERPQPILYRNLEI--
pt036553_POPTR_ IESLSCINQDLHWKLQQQRLAMLFGTGENHKDGSTVSTDPIENQVQKPQPIMFENLEISK
                **:***:******:*****:*****   * *: :.*        *::****::.****  

AT5G65590.1     ----VNSSSPSSPTKKGDNQTEWYFGN----------NSDNEGVISNNANTGGGGSEWNN
pt036553_POPTR_ PQVCAAGNSRKEGAASGDTATEWFFGNSYSQVTATPTNTSNNG---NNDNTG----NW-N
                    . ..* .. : .**. ***:***          *:.*:*   ** ***    :* *

AT5G65590.1     GIQAWTDLNHYNALP
pt036553_POPTR_ GVQAWGDLHQYSALP
                *:*** **::*.***
BoxShade v3.31 C (beta, 970507) Output
AT5G65590.1     M S S H T N L P S P K P V P K P D H R I S G T S Q - - - T K K P P S S S V A Q D Q Q N L K C P R C N S P N T K F C Y Y N
pt036553_POPTR_    M V P P D N L - Q E K Q T S K D D N Q S S S S S R K T A T T R P - - - - - - - Q E Q A L K C P R C E S P N T K F C Y Y N
 
AT5G65590.1     N Y S L S Q P R H F C K S C R R Y W T R G G A L R N V P I G G G C R K T K K S I K P N S S M N T L P S S S S S Q R F F S
pt036553_POPTR_    N Y S L T Q P R H F C K T C R R Y W T K G G A L R S V P I G G G C R K N K K - I K S S S R L - - - - S S D S K D S S G S
 
AT5G65590.1     S I M E D S S K F F P P P T T M D F Q L A G L S L N K M N D L Q - - L L N N - - - - - - - - - - - - - - - - - - Q E V L
pt036553_POPTR_    S E I A G F S F F H G L S P A V D F N L G G L S F P R L N P S Q N G L Y N H F P S F G D I S A T S A A A A T V T S P S F
 
AT5G65590.1     D L R P M M S S G R E N T P V D V G S G L S L M G F G D F N N N H S P T G F T T A - - - - - - G A S - - - D G N L A S S
pt036553_POPTR_    T L D P S V S S - - - - - - - - T G S - C S L M G F - N Y P L T S V A S G F C G A I Q E N I G G A S M N I N T N L P S S
 
AT5G65590.1     I E T L S C L N Q D L H W R L Q Q Q R M A M L F G - - - N S K E E T V V - - - - - - - - V E R P Q P I L Y R N L E I - -
pt036553_POPTR_    I E S L S C I N Q D L H W K L Q Q Q R L A M L F G T G E N H K D G S T V S T D P I E N Q V Q K P Q P I M F E N L E I S K
 
AT5G65590.1     - - - - V N S S S P S S P T K K G D N Q T E W Y F G N - - - - - - - - - - N S D N E G V I S N N A N T G G G G S E W N N
pt036553_POPTR_    P Q V C A A G N S R K E G A A S G D T A T E W F F G N S Y S Q V T A T P T N T S N N G - - - N N D N T G - - - - N W - N
 
AT5G65590.1     G I Q A W T D L N H Y N A L P
pt036553_POPTR_    G V Q A W G D L H Q Y S A L P
 
0