fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G65670.1 SLKATELTLGLPGSQS at 66/338 in AT5G65670.1
SLKATELTLGLPGSQS at 66/336 in AT5G65670.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001067 NLKATELRLGLPGSQS in 41/315 AT5G65670.2 1st_not 0.6288 II
Pt039771 NLKATELRLGLPGSQS in 72/366 AT5G65670.2 1st_not 0.5872 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G65670.1     MSP------EEELQSNVSVASS--SPTSNCISRNTLGG--LKEHNYLGLSDCSSVGSSTL
pt039771_POPTR_ MSPPLLGVVEEEGHSNVTLLASPASAESAC-----LNGLELKERNYMGLSDCSSVDSSAV
gm001067_Glyma0 ------------------MTAG------------------FKECNYLGLSDCSSVDSSTV
                                  : :.                  :** **:********.**::

AT5G65670.1     SPLAEDDKATISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKPFFPLLPSKDEICSS
pt039771_POPTR_ SAASDERKTSLNLKATELRLGLPGSQSPERNHELSLLSSALLDEKPFFPLHPSNDGHYSS
gm001067_Glyma0 PNLSDEKKENLNLKATELRLGLPGSQSPERETELFSLSSTKLDEKPLFPLLPTKDGICSL
                .  ::: * .:.****** ********* *: **  **.: *****:*** *::*   * 

AT5G65670.1     SQKNNASGNKRGFSDTMDQFAEAKSSVYTEKNWMF-PEAA-------------ATQSVTK
pt039771_POPTR_ TQKNVVSGNKRVFSDAMDEFSESKFLSNSEVNAMLSPRPSPNMGLKPGMLENLGVQQAKV
gm001067_Glyma0 SQKTVVSGNKRGFADTMD----PEFPGNAGINMMLSPKPS-------------GVQPTTV
                :**. .***** *:*:**    .:    :  * *: *..:             ..* .. 

AT5G65670.1     KDV--P---QNIPKG-------QSSTTNNSS----------SPPAAKAQIVGWPPVRSYR
pt039771_POPTR_ KEIVAPKAGQERPHAANETRPLRNSSANNS-----------SAPAPKAQVVGWPPIKSFR
gm001067_Glyma0 KEI--------------PSKVLQNFLQRQMELVITIHQELLSVAVHRAQVVGWPPIRSFR
                *::                   :.   .:            * .. :**:*****::*:*

AT5G65670.1     KNTLATTCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTF
pt039771_POPTR_ KNSLATTSKNTEEVDGKAGPGALFIKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCF
gm001067_Glyma0 KNSLATTSKNNDEVDGKPGAAALFVKVSMDGAPYLRKVDLRNYTMYQELSSALEKMFSCF
                **:****.**.:****:.*..***:****************.*: * **********: *

AT5G65670.1     TLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLK
pt039771_POPTR_ TIGQYGSHGAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIETCKRLR
gm001067_Glyma0 TLGQCGSHGAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWDMFIDTCKRLK
                *:** **:**.*::****:******:*.:********************:***:.**:*:

AT5G65670.1     IMKGCDAIGLAAAPRAMEKSKMRA
pt039771_POPTR_ IMKSSDAIGL--APRAMEKCKNRN
gm001067_Glyma0 IMKGSDAIGL--APRAMEKSRSRC
                ***..*****  *******.: *
BoxShade v3.31 C (beta, 970507) Output
AT5G65670.1     M S P - - - - - - E E E L Q S N V S V A S S - - S P T S N C I S R N T L G G - - L K E H N Y L G L S D C S S V G S S T L
pt039771_POPTR_    M S P P L L G V V E E E G H S N V T L L A S P A S A E S A C - - - - - L N G L E L K E R N Y M G L S D C S S V D S S A V
gm001067_Glyma0    - - - - - - - - - - - - - - - - - - M T A G - - - - - - - - - - - - - - - - - - F K E C N Y L G L S D C S S V D S S T V
 
AT5G65670.1     S P L A E D D K A T I S L K A T E L T L G L P G S Q S P A R D T E L N L L S P A K L D E K P F F P L L P S K D E I C S S
pt039771_POPTR_    S A A S D E R K T S L N L K A T E L R L G L P G S Q S P E R N H E L S L L S S A L L D E K P F F P L H P S N D G H Y S S
gm001067_Glyma0    P N L S D E K K E N L N L K A T E L R L G L P G S Q S P E R E T E L F S L S S T K L D E K P L F P L L P T K D G I C S L
 
AT5G65670.1     S Q K N N A S G N K R G F S D T M D Q F A E A K S S V Y T E K N W M F - P E A A - - - - - - - - - - - - - A T Q S V T K
pt039771_POPTR_    T Q K N V V S G N K R V F S D A M D E F S E S K F L S N S E V N A M L S P R P S P N M G L K P G M L E N L G V Q Q A K V
gm001067_Glyma0    S Q K T V V S G N K R G F A D T M D - - - - P E F P G N A G I N M M L S P K P S - - - - - - - - - - - - - G V Q P T T V
 
AT5G65670.1     K D V - - P - - - Q N I P K G - - - - - - - Q S S T T N N S S - - - - - - - - - - S P P A A K A Q I V G W P P V R S Y R
pt039771_POPTR_    K E I V A P K A G Q E R P H A A N E T R P L R N S S A N N S - - - - - - - - - - - S A P A P K A Q V V G W P P I K S F R
gm001067_Glyma0    K E I - - - - - - - - - - - - - - P S K V L Q N F L Q R Q M E L V I T I H Q E L L S V A V H R A Q V V G W P P I R S F R
 
AT5G65670.1     K N T L A T T C K N S D E V D G R P G S G A L F V K V S M D G A P Y L R K V D L R S Y T N Y G E L S S A L E K M F T T F
pt039771_POPTR_    K N S L A T T S K N T E E V D G K A G P G A L F I K V S M D G A P Y L R K V D L R N Y S A Y Q E L S S A L E K M F S C F
gm001067_Glyma0    K N S L A T T S K N N D E V D G K P G A A A L F V K V S M D G A P Y L R K V D L R N Y T M Y Q E L S S A L E K M F S C F
 
AT5G65670.1     T L G Q C G S N G A A G K D M L S E T K L K D L L N G K D Y V L T Y E D K D G D W M L V G D V P W E M F I D V C K K L K
pt039771_POPTR_    T I G Q Y G S H G A P G R E M L S E S K L K D L L H G S E Y V L T Y E D K D G D W M L V G D V P W E M F I E T C K R L R
gm001067_Glyma0    T L G Q C G S H G A P G R E M L S E S K L K D L L H G S E Y V L T Y E D K D G D W M L V G D V P W D M F I D T C K R L K
 
AT5G65670.1     I M K G C D A I G L A A A P R A M E K S K M R A
pt039771_POPTR_    I M K S S D A I G L - - A P R A M E K C K N R N
gm001067_Glyma0    I M K G S D A I G L - - A P R A M E K S R S R C
 
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