fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G65670.1 SLKATELTLGLPGSQS at 66/338 in AT5G65670.1
SLKATELTLGLPGSQS at 66/336 in AT5G65670.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt039771 NLKATELRLGLPGSQS in 72/366 AT5G65670.2 1st_not 0.5872 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G65670.1     MSP------EEELQSNVSVASSSPTSNCISRNTLGGLKEHNYLGLSDCSSVGSSTLSPLA
pt039771_POPTR_ MSPPLLGVVEEEGHSNVTLLASPASAESACLNGL-ELKERNYMGLSDCSSVDSSAVSAAS
                ***      *** :***:: :*..:::. . * *  ***:**:********.**::*. :

AT5G65670.1     EDDKATISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKPFFPLLPSKDEICSSSQKN
pt039771_POPTR_ DERKTSLNLKATELRLGLPGSQSPERNHELSLLSSALLDEKPFFPLHPSNDGHYSSTQKN
                :: *:::.****** ********* *: **.***.* ********* **:*   **:***

AT5G65670.1     NASGNKRGFSDTMDQFAEAKSSVYTEKNWMFP-------------------EAAATQSVT
pt039771_POPTR_ VVSGNKRVFSDAMDEFSESKFLSNSEVNAMLSPRPSPNMGLKPGMLENLGVQQAKVKEIV
                 .***** ***:**:*:*:*    :* * *:.                   : * .:.:.

AT5G65670.1     KKDVPQNIPKGQSST------TNNSSSPPAAKAQIVGWPPVRSYRKNTLATTCKNSDEVD
pt039771_POPTR_ APKAGQERPHAANETRPLRNSSANNSSAPAPKAQVVGWPPIKSFRKNSLATTSKNTEEVD
                  .. *: *:. ..*      : *.**.**.***:*****::*:***:****.**::***

AT5G65670.1     GRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDM
pt039771_POPTR_ GKAGPGALFIKVSMDGAPYLRKVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGAPGREM
                *:.*.****:****************.*: * **********: **:** **:**.*::*

AT5G65670.1     LSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAAPR
pt039771_POPTR_ LSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIETCKRLRIMKSSDAIGL--APR
                ***:******:*.:************************:.**:*:***..*****  ***

AT5G65670.1     AMEKSKMRA
pt039771_POPTR_ AMEKCKNRN
                ****.* *
BoxShade v3.31 C (beta, 970507) Output
AT5G65670.1     M S P - - - - - - E E E L Q S N V S V A S S S P T S N C I S R N T L G G L K E H N Y L G L S D C S S V G S S T L S P L A
pt039771_POPTR_    M S P P L L G V V E E E G H S N V T L L A S P A S A E S A C L N G L - E L K E R N Y M G L S D C S S V D S S A V S A A S
 
AT5G65670.1     E D D K A T I S L K A T E L T L G L P G S Q S P A R D T E L N L L S P A K L D E K P F F P L L P S K D E I C S S S Q K N
pt039771_POPTR_    D E R K T S L N L K A T E L R L G L P G S Q S P E R N H E L S L L S S A L L D E K P F F P L H P S N D G H Y S S T Q K N
 
AT5G65670.1     N A S G N K R G F S D T M D Q F A E A K S S V Y T E K N W M F P - - - - - - - - - - - - - - - - - - - E A A A T Q S V T
pt039771_POPTR_    V V S G N K R V F S D A M D E F S E S K F L S N S E V N A M L S P R P S P N M G L K P G M L E N L G V Q Q A K V K E I V
 
AT5G65670.1     K K D V P Q N I P K G Q S S T - - - - - - T N N S S S P P A A K A Q I V G W P P V R S Y R K N T L A T T C K N S D E V D
pt039771_POPTR_    A P K A G Q E R P H A A N E T R P L R N S S A N N S S A P A P K A Q V V G W P P I K S F R K N S L A T T S K N T E E V D
 
AT5G65670.1     G R P G S G A L F V K V S M D G A P Y L R K V D L R S Y T N Y G E L S S A L E K M F T T F T L G Q C G S N G A A G K D M
pt039771_POPTR_    G K A G P G A L F I K V S M D G A P Y L R K V D L R N Y S A Y Q E L S S A L E K M F S C F T I G Q Y G S H G A P G R E M
 
AT5G65670.1     L S E T K L K D L L N G K D Y V L T Y E D K D G D W M L V G D V P W E M F I D V C K K L K I M K G C D A I G L A A A P R
pt039771_POPTR_    L S E S K L K D L L H G S E Y V L T Y E D K D G D W M L V G D V P W E M F I E T C K R L R I M K S S D A I G L - - A P R
 
AT5G65670.1     A M E K S K M R A
pt039771_POPTR_    A M E K C K N R N
 
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