fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G65670.1 SLKATELTLGLPGSQS at 66/338 in AT5G65670.1
SLKATELTLGLPGSQS at 66/336 in AT5G65670.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt039771 NLKATELRLGLPGSQS in 72/366 AT5G65670.2 1st_not 0.5872 II
Pt011954 NLKETELRLGLPGYQS in 60/349 AT4G29080.1 not_not 0.4176 III
Pt030401 NMKETELRLGLPGSQS in 66/335 AT4G29080.1 not_not 0.4176 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G65670.1     MSP------EEELQSNVSVASSSPTSNCISRNTLGGLKEHNYLGLSDCSSV---------
pt011954_POPTR_ MSS--------------------------------IPKEHDYIGLSETPSMEKISDKLSS
pt030401_POPTR_ MYS--------------------------------IPKEHDYIGLSETPSMENISEKLSS
pt039771_POPTR_ MSPPLLGVVEEEGHSNVTLLASPASAESACLNGL-ELKERNYMGLSDCSSV---------
                * .                                  **::*:***: .*:         

AT5G65670.1     ---GSSTLSPLAEDD-------------KATISLKATELTLGLPGSQSPARDTELNLLSP
pt011954_POPTR_ ---SSSTLSTEENIN---SNSNSNSNSTNTSLNLKETELRLGLPGYQSPERKLTLPAAGV
pt030401_POPTR_ SSTSSSTLSTEEKNNSSSSNSNNNNKNNNTSLNMKETELRLGLPGSQSPERKPTVPAAGV
pt039771_POPTR_ ---DSSAVSAASDER-------------KTSLNLKATELRLGLPGSQSPERNHELSLLSS
                   .**::*.  .               ::::.:* *** ***** *** *.  :   . 

AT5G65670.1     AKL------DEKPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQFAEAKSSVYTEKNW
pt011954_POPTR_ SLFGKDIDTNNTNGYPLRPL---------KNLVSGTKRGFSDAIV---------GSSGKW
pt030401_POPTR_ SLVGKDIDTNNTNAYSLIPV---------KNLVSGAKRVFSDAID---------GSTGKW
pt039771_POPTR_ ALL------DEKPFFPLHPSNDGHYSSTQKNVVSGNKRVFSDAMDEFSESKFLSNSEVNA
                : .      ::.  :.* *          ** .** ** ***::           :  : 

AT5G65670.1     MFP-------------------------EAAATQSVTKK-DVPQNIPKGQSST------T
pt011954_POPTR_ VFSGSNGSEVDLGKGAILFSPRGDNGNSQKSCVAGPAKKDDVAQS-PKPVQEKISQVAAA
pt030401_POPTR_ VFSG------------------GDNGNPQKSRVAGPAKK-DVAQS-PKPVQEKNSQVAAA
pt039771_POPTR_ MLSPRPSPNMGLKPGML------ENLGVQQAKVKEIVAP-KAGQERPHAANETRPLRNSS
                ::.                         : : .   .   .. *. *:  ...      :

AT5G65670.1     NNSSSPPAAKAQIVGWPPVRSYRKNTLATT-CKNSDEVDGRPGSGALFVKVSMDGAPYLR
pt011954_POPTR_ NENSSAPAAKAQVVGWPPIRSFRKNTMASSLVKNNEDVEGKSGYGCLYVKVSMDGAPYLR
pt030401_POPTR_ NENSSAPAAKTQVVGWPPIRSFRKNTMASSLAKNNEDVDGKSGYGYLYVKVSMDGAPYLR
pt039771_POPTR_ ANNSSAPAPKAQVVGWPPIKSFRKNSLATT-SKNTEEVDGKAGPGALFIKVSMDGAPYLR
                 :.**.**.*:*:*****::*:***::*::  **.::*:*:.* * *::***********

AT5G65670.1     KVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYED
pt011954_POPTR_ KVDLKTYSNYLELSSALEKMFSCFTIGQCGSHGLRGQDGLTESRLKDILHGSEYVLTYED
pt030401_POPTR_ KVDLKTYGNYLELSSALEKMFGCFTIGQCGSHGLAARDGLTESCLKD-LHGSEYVLTFED
pt039771_POPTR_ KVDLRNYSAYQELSSALEKMFSCFTIGQYGSHGAPGREMLSESKLKDLLHGSEYVLTYED
                ****:.*  * **********  **:** **:*  .:: *:*: *** *:*.:****:**

AT5G65670.1     KDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAAPRAMEKSKMRA
pt011954_POPTR_ KDGDWMLVGDVPWDMFTNSCRRLRIMKGSEAIGL--APRAMEKCKNRN
pt030401_POPTR_ KDGDWMLVGDVPWDMFTDSCRRLRIMKGSEAIGL--APRAMEKCKNRN
pt039771_POPTR_ KDGDWMLVGDVPWEMFIETCKRLRIMKSSDAIGL--APRAMEKCKNRN
                *************:** : *::*:***..:****  *******.* *
BoxShade v3.31 C (beta, 970507) Output
AT5G65670.1     M S P - - - - - - E E E L Q S N V S V A S S S P T S N C I S R N T L G G L K E H N Y L G L S D C S S V - - - - - - - - -
pt011954_POPTR_    M S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I P K E H D Y I G L S E T P S M E K I S D K L S S
pt030401_POPTR_    M Y S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I P K E H D Y I G L S E T P S M E N I S E K L S S
pt039771_POPTR_    M S P P L L G V V E E E G H S N V T L L A S P A S A E S A C L N G L - E L K E R N Y M G L S D C S S V - - - - - - - - -
 
AT5G65670.1     - - - G S S T L S P L A E D D - - - - - - - - - - - - - K A T I S L K A T E L T L G L P G S Q S P A R D T E L N L L S P
pt011954_POPTR_    - - - S S S T L S T E E N I N - - - S N S N S N S N S T N T S L N L K E T E L R L G L P G Y Q S P E R K L T L P A A G V
pt030401_POPTR_    S S T S S S T L S T E E K N N S S S S N S N N N N K N N N T S L N M K E T E L R L G L P G S Q S P E R K P T V P A A G V
pt039771_POPTR_    - - - D S S A V S A A S D E R - - - - - - - - - - - - - K T S L N L K A T E L R L G L P G S Q S P E R N H E L S L L S S
 
AT5G65670.1     A K L - - - - - - D E K P F F P L L P S K D E I C S S S Q K N N A S G N K R G F S D T M D Q F A E A K S S V Y T E K N W
pt011954_POPTR_    S L F G K D I D T N N T N G Y P L R P L - - - - - - - - - K N L V S G T K R G F S D A I V - - - - - - - - - G S S G K W
pt030401_POPTR_    S L V G K D I D T N N T N A Y S L I P V - - - - - - - - - K N L V S G A K R V F S D A I D - - - - - - - - - G S T G K W
pt039771_POPTR_    A L L - - - - - - D E K P F F P L H P S N D G H Y S S T Q K N V V S G N K R V F S D A M D E F S E S K F L S N S E V N A
 
AT5G65670.1     M F P - - - - - - - - - - - - - - - - - - - - - - - - - E A A A T Q S V T K K - D V P Q N I P K G Q S S T - - - - - - T
pt011954_POPTR_    V F S G S N G S E V D L G K G A I L F S P R G D N G N S Q K S C V A G P A K K D D V A Q S - P K P V Q E K I S Q V A A A
pt030401_POPTR_    V F S G - - - - - - - - - - - - - - - - - - G D N G N P Q K S R V A G P A K K - D V A Q S - P K P V Q E K N S Q V A A A
pt039771_POPTR_    M L S P R P S P N M G L K P G M L - - - - - - E N L G V Q Q A K V K E I V A P - K A G Q E R P H A A N E T R P L R N S S
 
AT5G65670.1     N N S S S P P A A K A Q I V G W P P V R S Y R K N T L A T T - C K N S D E V D G R P G S G A L F V K V S M D G A P Y L R
pt011954_POPTR_    N E N S S A P A A K A Q V V G W P P I R S F R K N T M A S S L V K N N E D V E G K S G Y G C L Y V K V S M D G A P Y L R
pt030401_POPTR_    N E N S S A P A A K T Q V V G W P P I R S F R K N T M A S S L A K N N E D V D G K S G Y G Y L Y V K V S M D G A P Y L R
pt039771_POPTR_    A N N S S A P A P K A Q V V G W P P I K S F R K N S L A T T - S K N T E E V D G K A G P G A L F I K V S M D G A P Y L R
 
AT5G65670.1     K V D L R S Y T N Y G E L S S A L E K M F T T F T L G Q C G S N G A A G K D M L S E T K L K D L L N G K D Y V L T Y E D
pt011954_POPTR_    K V D L K T Y S N Y L E L S S A L E K M F S C F T I G Q C G S H G L R G Q D G L T E S R L K D I L H G S E Y V L T Y E D
pt030401_POPTR_    K V D L K T Y G N Y L E L S S A L E K M F G C F T I G Q C G S H G L A A R D G L T E S C L K D - L H G S E Y V L T F E D
pt039771_POPTR_    K V D L R N Y S A Y Q E L S S A L E K M F S C F T I G Q Y G S H G A P G R E M L S E S K L K D L L H G S E Y V L T Y E D
 
AT5G65670.1     K D G D W M L V G D V P W E M F I D V C K K L K I M K G C D A I G L A A A P R A M E K S K M R A
pt011954_POPTR_    K D G D W M L V G D V P W D M F T N S C R R L R I M K G S E A I G L - - A P R A M E K C K N R N
pt030401_POPTR_    K D G D W M L V G D V P W D M F T D S C R R L R I M K G S E A I G L - - A P R A M E K C K N R N
pt039771_POPTR_    K D G D W M L V G D V P W E M F I E T C K R L R I M K S S D A I G L - - A P R A M E K C K N R N
 
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