fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G66300.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030146 not found in 344aa AT2G18060.1 1st_not 0.574918566 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G66300.1     MMKVDQDYSCSIPPGFRFHPTDEELVGYYLKKKIASQRIDLDVIREIDLYKIEPWDLQER
gm030146_Glyma1 ---MESMESC-VPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQER
                   ::.  ** :******************:**:***:************:*********

AT5G66300.1     CRIGYEEQTEWYFFSHRDKKYPTGTRTNRATVAGFWKATGRDKAVYLNSKLIGMRKTLVF
gm030146_Glyma1 CRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYERAKLIGMRKTLVF
                ********.*******:**************:************** .:***********

AT5G66300.1     YRGRAPNGQKSDWIIHEYYSLESHQNSPPQEEGWVVCRAFKKRTTIPTKRRQL--WDPNC
gm030146_Glyma1 YKGRAPNGQKSDWIMHE-YRLESDENGPPQEEGWVVCRAFKKKTTGQTKTINIEGWESS-
                *:************:** * ***.:*.***************:**  **  ::  *:.. 

AT5G66300.1     LFYDDA-----TLLEPLDKRARHNPDFTATPF--KQELLSEASHVQDGDFGSMYLQCIDD
gm030146_Glyma1 YFYDEASGATSTLVDPIELISRQSQSFLAQNFMCKQEL--EADN----------LTCMHQ
                 ***:*     **::*::  :*:. .* *  *  ****  **.:          * *:.:

AT5G66300.1     DQFSQLPQLESPSLPSEITPHSTTF-SENSSRKDD---------MSSEKRITDWRYLDKF
gm030146_Glyma1 DPFVQLPQLESPSLPLVKKPSTVSLVSDNNNEGEDNQNRLLFNNNNTKKVTTDWRALDKF
                * * ***********   .* :.:: *:*... :*          .::*  **** ****

AT5G66300.1     VASQ---------------------------------------------FLMSGED----
gm030146_Glyma1 VASQLSQEVNTHETNVGVLSSSFEPHDDNHDMALLLLQSSRDEGNRLSPFLNTSSDCDNG
                ****                                             ** :..*    

AT5G66300.1     --
gm030146_Glyma1 IC
BoxShade v3.31 C (beta, 970507) Output
AT5G66300.1     M M K V D Q D Y S C S I P P G F R F H P T D E E L V G Y Y L K K K I A S Q R I D L D V I R E I D L Y K I E P W D L Q E R
gm030146_Glyma1    - - - M E S M E S C - V P P G F R F H P T D E E L V G Y Y L R K K V A S Q K I D L D V I R E I D L Y R I E P W D L Q E R
 
AT5G66300.1     C R I G Y E E Q T E W Y F F S H R D K K Y P T G T R T N R A T V A G F W K A T G R D K A V Y L N S K L I G M R K T L V F
gm030146_Glyma1    C R I G Y E E Q N E W Y F F S H K D K K Y P T G T R T N R A T M A G F W K A T G R D K A V Y E R A K L I G M R K T L V F
 
AT5G66300.1     Y R G R A P N G Q K S D W I I H E Y Y S L E S H Q N S P P Q E E G W V V C R A F K K R T T I P T K R R Q L - - W D P N C
gm030146_Glyma1    Y K G R A P N G Q K S D W I M H E - Y R L E S D E N G P P Q E E G W V V C R A F K K K T T G Q T K T I N I E G W E S S -
 
AT5G66300.1     L F Y D D A - - - - - T L L E P L D K R A R H N P D F T A T P F - - K Q E L L S E A S H V Q D G D F G S M Y L Q C I D D
gm030146_Glyma1    Y F Y D E A S G A T S T L V D P I E L I S R Q S Q S F L A Q N F M C K Q E L - - E A D N - - - - - - - - - - L T C M H Q
 
AT5G66300.1     D Q F S Q L P Q L E S P S L P S E I T P H S T T F - S E N S S R K D D - - - - - - - - - M S S E K R I T D W R Y L D K F
gm030146_Glyma1    D P F V Q L P Q L E S P S L P L V K K P S T V S L V S D N N N E G E D N Q N R L L F N N N N T K K V T T D W R A L D K F
 
AT5G66300.1     V A S Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F L M S G E D - - - -
gm030146_Glyma1    V A S Q L S Q E V N T H E T N V G V L S S S F E P H D D N H D M A L L L L Q S S R D E G N R L S P F L N T S S D C D N G
 
AT5G66300.1     - -
gm030146_Glyma1    I C
 
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