fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G66320.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001424 not found in 333aa AT5G66320.2 not_not 0.436594202 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G66320.1     ME--QAALKSSVRKEMALKTTSPVYEEFLAVTTAQNGFSVDDFSVDDLLDLSNDDVFADE
pt001424_POPTR_ MERVEGALKTSFRKEMAVKFSPQVLDDFWPVNVT-NGMSSDDFSVDELLDFSNENGFIED
                **  :.***:*.*****:* :. * ::* .*..: **:* ******:***:**:: * ::

AT5G66320.1     ETD---LKAQHEMVRVSSEEPNDDGDALRRSSDFSGCDDFGSLPTSELSLPADDLANLEW
pt001424_POPTR_ EENPCVVSVSHKQETLKEDKNND------RSPYFAVKEDFVSGPTSELCVPTDDLASLEW
                * :   :...*:   :..:: **      **. *:  :** * *****.:*:****.***

AT5G66320.1     LSHFVEDSFTEYSG--PNLTGTPT-EKPAWLTGDRKHPVTAVTEETCFKSPVPAKARSKR
pt001424_POPTR_ LSHFVEDSNSEYAAPFPAIVSPPEPEKENFAEQEK-----SVLTEPCFKTPVPAKARSKR
                ******** :**:.  * :...*  **  :   ::     :*  *.***:**********

AT5G66320.1     NRNGLKVWSLGSSSSSGPSSSGSTSSSSSGPSSPWFSGAELL---EPVVTSERPPFPKKH
pt001424_POPTR_ TRTGVRVWPLGSPTLTESSTSSSSSTSSSSPSSPWLIHTKPLLNAEP-LWFEKPVVKRMK
                .*.*::**.***.: : .*:*.*:*:***.*****:  :: *   ** :  *:* . : :

AT5G66320.1     KKRSAESVFSGELQQLQPQRKCSHCGVQKTPQWRAGPMGAKTLCNACGVRYKSGRLLPEY
pt001424_POPTR_ KKPSFHAAASGGGGGSHSSRRCSHCGIQKTPQWRAGPNGSKTLCNACGVRYKSGRLLPEY
                ** * .:. **     :..*:*****:********** *:********************

AT5G66320.1     RPACSPTFSSELHSNHHRKVIEMRRKKEPTSDNETGLNQLVQSPQAVPSF-
pt001424_POPTR_ RPACSPTFSKELHSNHHRKVLEMRRKKEILGQTEPGLVQPV-----VPSCV
                *********.**********:*******  .:.*.** * *     ***
BoxShade v3.31 C (beta, 970507) Output
AT5G66320.1     M E - - Q A A L K S S V R K E M A L K T T S P V Y E E F L A V T T A Q N G F S V D D F S V D D L L D L S N D D V F A D E
pt001424_POPTR_    M E R V E G A L K T S F R K E M A V K F S P Q V L D D F W P V N V T - N G M S S D D F S V D E L L D F S N E N G F I E D
 
AT5G66320.1     E T D - - - L K A Q H E M V R V S S E E P N D D G D A L R R S S D F S G C D D F G S L P T S E L S L P A D D L A N L E W
pt001424_POPTR_    E E N P C V V S V S H K Q E T L K E D K N N D - - - - - - R S P Y F A V K E D F V S G P T S E L C V P T D D L A S L E W
 
AT5G66320.1     L S H F V E D S F T E Y S G - - P N L T G T P T - E K P A W L T G D R K H P V T A V T E E T C F K S P V P A K A R S K R
pt001424_POPTR_    L S H F V E D S N S E Y A A P F P A I V S P P E P E K E N F A E Q E K - - - - - S V L T E P C F K T P V P A K A R S K R
 
AT5G66320.1     N R N G L K V W S L G S S S S S G P S S S G S T S S S S S G P S S P W F S G A E L L - - - E P V V T S E R P P F P K K H
pt001424_POPTR_    T R T G V R V W P L G S P T L T E S S T S S S S S T S S S S P S S P W L I H T K P L L N A E P - L W F E K P V V K R M K
 
AT5G66320.1     K K R S A E S V F S G E L Q Q L Q P Q R K C S H C G V Q K T P Q W R A G P M G A K T L C N A C G V R Y K S G R L L P E Y
pt001424_POPTR_    K K P S F H A A A S G G G G G S H S S R R C S H C G I Q K T P Q W R A G P N G S K T L C N A C G V R Y K S G R L L P E Y
 
AT5G66320.1     R P A C S P T F S S E L H S N H H R K V I E M R R K K E P T S D N E T G L N Q L V Q S P Q A V P S F -
pt001424_POPTR_    R P A C S P T F S K E L H S N H H R K V L E M R R K K E I L G Q T E P G L V Q P V - - - - - V P S C V
 
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