fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G66320.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037224 not found in 376aa AT5G66320.2 1st_not 0.436594202 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G66320.1     --------------------------------------ME--QAALKSSVRKEMALKTTS
pt037224_POPTR_ MLSSLIQCFTKLFSSPKFTTPSLLSFSYPLRFRFKKQEMECVEGALKTSFRKEMAMKFSP
                                                      **  :.***:*.*****:* :.

AT5G66320.1     PVYEEFLAVTTAQNGFSVDDFSVDDLLDLSNDDVFADEETDLKAQHEM-----VRVS---
pt037224_POPTR_ QVLDDFWAVNVP-NGMSSDDFSVEKLLDFSNENDFIEEEEEEGGDKEKPCVFSVSVSPKQ
                 * ::* **... **:* *****:.***:**:: * :** :  .::*      * **   

AT5G66320.1     ---SEEPNDDGDALRRSSDFSGCDDFGSLPTSELSLPADDLANLEWLSHFVEDSFTEYSG
pt037224_POPTR_ EALEEDKNSDS-----SPGFAVKDDFFSVPTSELCVPTDDFASLEWLSHFVEDSNSEYAA
                   .*: *.*.     *..*:  *** *:*****.:*:**:*.*********** :**:.

AT5G66320.1     PNLTGTPTEKPAWLTGDRKHPVTA---VTEETCFKSPVPAKARSKRNRNGLKVWSLGSSS
pt037224_POPTR_ PFPTNVSPPEP-----KKENPVEQEKLVLEEPLFKTPVPGKARSKRTRNGVRVWPLGSPS
                *  *.... :*     .:::**     * **. **:***.******.***::**.***.*

AT5G66320.1     SSGPSSSGSTSSSSSGPSSPW--FSGAEL-LEPVVTSERPPFPKKHKKRSAESVFSGELQ
pt037224_POPTR_ LT-ESSSSSSSTSSSSPSSPWLVYSKPCLKVEPVWFEK--PVAKKMKKPAVEAAAKG--C
                 :  ***.*:*:***.*****  :* . * :***  .:  *..** ** :.*:. .*   

AT5G66320.1     QLQPQRKCSHCGVQKTPQWRAGPMGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHS
pt037224_POPTR_ GSNSSRRCSHCGVQKTPQWRAGPNGSKTLCNACGVRYKSGRLLPEYRPACSPTFSKELHS
                  :..*:**************** *:*****************************.****

AT5G66320.1     NHHRKVIEMRRKKEPTSDNETGLNQLVQSPQAVPSF-
pt037224_POPTR_ NHHRKVLEMRRNKEGLVPTEPGLAQ-----PFVPSFG
                ******:****:**    .*.** *       ****
BoxShade v3.31 C (beta, 970507) Output
AT5G66320.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E - - Q A A L K S S V R K E M A L K T T S
pt037224_POPTR_    M L S S L I Q C F T K L F S S P K F T T P S L L S F S Y P L R F R F K K Q E M E C V E G A L K T S F R K E M A M K F S P
 
AT5G66320.1     P V Y E E F L A V T T A Q N G F S V D D F S V D D L L D L S N D D V F A D E E T D L K A Q H E M - - - - - V R V S - - -
pt037224_POPTR_    Q V L D D F W A V N V P - N G M S S D D F S V E K L L D F S N E N D F I E E E E E E G G D K E K P C V F S V S V S P K Q
 
AT5G66320.1     - - - S E E P N D D G D A L R R S S D F S G C D D F G S L P T S E L S L P A D D L A N L E W L S H F V E D S F T E Y S G
pt037224_POPTR_    E A L E E D K N S D S - - - - - S P G F A V K D D F F S V P T S E L C V P T D D F A S L E W L S H F V E D S N S E Y A A
 
AT5G66320.1     P N L T G T P T E K P A W L T G D R K H P V T A - - - V T E E T C F K S P V P A K A R S K R N R N G L K V W S L G S S S
pt037224_POPTR_    P F P T N V S P P E P - - - - - K K E N P V E Q E K L V L E E P L F K T P V P G K A R S K R T R N G V R V W P L G S P S
 
AT5G66320.1     S S G P S S S G S T S S S S S G P S S P W - - F S G A E L - L E P V V T S E R P P F P K K H K K R S A E S V F S G E L Q
pt037224_POPTR_    L T - E S S S S S S S T S S S S P S S P W L V Y S K P C L K V E P V W F E K - - P V A K K M K K P A V E A A A K G - - C
 
AT5G66320.1     Q L Q P Q R K C S H C G V Q K T P Q W R A G P M G A K T L C N A C G V R Y K S G R L L P E Y R P A C S P T F S S E L H S
pt037224_POPTR_    G S N S S R R C S H C G V Q K T P Q W R A G P N G S K T L C N A C G V R Y K S G R L L P E Y R P A C S P T F S K E L H S
 
AT5G66320.1     N H H R K V I E M R R K K E P T S D N E T G L N Q L V Q S P Q A V P S F -
pt037224_POPTR_    N H H R K V L E M R R N K E G L V P T E P G L A Q - - - - - P F V P S F G
 
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