fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G66700.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001800 not found in 214aa AT4G36740.1 1st_not 0.415865384 II
Pt037614 not found in 204aa AT4G36740.1 1st_not 0.444711538 II
Pt002973 not found in 204aa AT4G36740.1 not_not 0.40625 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G66700.1     MDHGRLMDDQMMLGSQVYP--YTTQPQNSHCIIVNQIDGGEESKPVKRRRKRRSKGSSAT
pt037614_POPTR_ MSYK--LEDHMALTSQLYPG-VFTQ------MVPQQ---GES-KP-RRRR-KKNKDADLS
pt002973_POPTR_ MNHK--VEDHIALISQLYPG-LYTQ------MVPKQ---GES-KP-RRRR-KKNTGEGVS
gm001800_Glyma0 MNHRQPFQDHMMLMSQLLPADAYTQ------IIAQQ---GDTKKP-RRRRNKKNKGGENA
                *.:   .:*:: * **: *    **      :: :*   *:  ** :*** ::...   :

AT5G66700.1     NEEDVAEIGGMLRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQN
pt037614_POPTR_ GA----------RKRKLNEEQVNLLEMNFGNEHKLESERKDKLASELGLDPRQVAVWFQN
pt002973_POPTR_ GA----------RKRKLSAEQVNFLEMNFGDEHKLETERKDKLASDLGLDPRQVAVWFQN
gm001800_Glyma0 ASE-------ANKKRKLSDDQVNLLEQNFGNEHKLESERKDRLAMELGLDPRQVAVWFQN
                            :****. :***:** .**:*****: **:::* :**************

AT5G66700.1     RRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSEIRKLSERLEEMP
pt037614_POPTR_ RRARWKNKKLEEEYTKLKTSHENIVVEKCQLESEVLKLKEQLSEAEKEIQRLSDRIDGVS
pt002973_POPTR_ RRARWKNKKLEEEYTKLKTAHESIVVQKCQLESEVLKLKEQLSRTEKEIQRLSDRADRVS
gm001800_Glyma0 RRARWKNKKLEEEYSNLKKNHEATLLEKCRLETEVLKLKEQLSEAEKEIQRLLESAERVP
                **************::**. *:  :: :*:**:::***.****.::.**::* :  : :.

AT5G66700.1     TNSSSSSLSV--EANNAPTDFELA-PETNYNIPFYM-LDNNYLQSMEYWDGLYV
pt037614_POPTR_ TNSPSSSLSM---AMDPPFLGEFA-MEGYEDAAFYMPPENNYIPGME-WINLYM
pt002973_POPTR_ TNSPSSSLSM---AIEHPFLGEFAVLEGYGD-AFYMPPENNYIPGME-WISQYM
gm001800_Glyma0 SNSSSSSQSQSMEAVDPPFFGEFG-VDGYEDDVFYV-PEIHYINGME-WINLYM
                :**.*** *    * : *   *:.  :   :  **:  : :*: .** * . *:
BoxShade v3.31 C (beta, 970507) Output
AT5G66700.1     M D H G R L M D D Q M M L G S Q V Y P - - Y T T Q P Q N S H C I I V N Q I D G G E E S K P V K R R R K R R S K G S S A T
pt037614_POPTR_    M S Y K - - L E D H M A L T S Q L Y P G - V F T Q - - - - - - M V P Q Q - - - G E S - K P - R R R R - K K N K D A D L S
pt002973_POPTR_    M N H K - - V E D H I A L I S Q L Y P G - L Y T Q - - - - - - M V P K Q - - - G E S - K P - R R R R - K K N T G E G V S
gm001800_Glyma0    M N H R Q P F Q D H M M L M S Q L L P A D A Y T Q - - - - - - I I A Q Q - - - G D T K K P - R R R R N K K N K G G E N A
 
AT5G66700.1     N E E D V A E I G G M L R K R K L T D E Q V N M L E Y S F G N E H K L E S G R K E K I A G E L G L D P R Q V A V W F Q N
pt037614_POPTR_    G A - - - - - - - - - - R K R K L N E E Q V N L L E M N F G N E H K L E S E R K D K L A S E L G L D P R Q V A V W F Q N
pt002973_POPTR_    G A - - - - - - - - - - R K R K L S A E Q V N F L E M N F G D E H K L E T E R K D K L A S D L G L D P R Q V A V W F Q N
gm001800_Glyma0    A S E - - - - - - - A N K K R K L S D D Q V N L L E Q N F G N E H K L E S E R K D R L A M E L G L D P R Q V A V W F Q N
 
AT5G66700.1     R R A R W K N K K L E E E Y A K L K N H H D N V V L G Q C Q L E S Q I L K L T E Q L S E A Q S E I R K L S E R L E E M P
pt037614_POPTR_    R R A R W K N K K L E E E Y T K L K T S H E N I V V E K C Q L E S E V L K L K E Q L S E A E K E I Q R L S D R I D G V S
pt002973_POPTR_    R R A R W K N K K L E E E Y T K L K T A H E S I V V Q K C Q L E S E V L K L K E Q L S R T E K E I Q R L S D R A D R V S
gm001800_Glyma0    R R A R W K N K K L E E E Y S N L K K N H E A T L L E K C R L E T E V L K L K E Q L S E A E K E I Q R L L E S A E R V P
 
AT5G66700.1     T N S S S S S L S V - - E A N N A P T D F E L A - P E T N Y N I P F Y M - L D N N Y L Q S M E Y W D G L Y V
pt037614_POPTR_    T N S P S S S L S M - - - A M D P P F L G E F A - M E G Y E D A A F Y M P P E N N Y I P G M E - W I N L Y M
pt002973_POPTR_    T N S P S S S L S M - - - A I E H P F L G E F A V L E G Y G D - A F Y M P P E N N Y I P G M E - W I S Q Y M
gm001800_Glyma0    S N S S S S S Q S Q S M E A V D P P F F G E F G - V D G Y E D D V F Y V - P E I H Y I N G M E - W I N L Y M
 
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