fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G66730.1 LSLAPGLGLGLPCSSG at 416/500 in AT5G66730.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os011706 not found in 432aa AT5G66730.1 1st_1st 0.489361702 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G66730.1     MPVDLDNSSTVSGDASVSSTGNQNL-----TPKSVGKKKRNLPGMPDPDAEVIALSPKTL
Os011706_Os03t0 MEVETSSGTAERG----AGAGAQQQPPPQPQPQPPAKKKRALPGMPDPDAEVIALSPKTL
                * *: ...::  *    :.:* *:       *:. .**** *******************

AT5G66730.1     MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHHDPS
Os011706_Os03t0 LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSGKEVRKRVYVCPEPTCVHHDPS
                :************************************* *****:***** . *******

AT5G66730.1     RALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSRR
Os011706_Os03t0 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTKTCGSREYRCDCGTLFSRR
                ************************:***************:* **::**:**********

AT5G66730.1     DSFITHRAFCDALAEESAKNHTQSKKLYPETVTRKN-----PEIEQKSPAAVESSPSLPP
Os011706_Os03t0 DSFITHRAFCDALAEESAKARAAPPPPADEDGTSASAGAPPPQAPLPPPAPVPA-----P
                ******************* :: .     *  *  .     *:    .**.* :     *

AT5G66730.1     SSPPSVAIAPAPAISVETESVKIIS---------SSVLPIQNSPESQENNNHPEVIIEEA
Os011706_Os03t0 APPPPPAAAPAPAAQPEQRAAAVAAWRRRRKASLAACLHRRRWPRRRSTRT-PSELERVA
                :.**. * ***** . * .:. : :         :: *  :. *. :.... *. : . *

AT5G66730.1     SRTIGFNVSSSDLSNDHSNNNGGYAGLFVSSTASPSLYASS----------------TAS
Os011706_Os03t0 IR---------------------------SARCLPSLRRCASRPTRRRRCLRRLYQLTGS
                 *                           *: . ***  .:                *.*

AT5G66730.1     PSL---FAPSSSMEPISLCLSTNPSLFGPTIRDPPHFLTPLPPQPAMSATALLQKAAQMG
Os011706_Os03t0 SSLRRHRRPRRRTCPPRRCFRR------PRRWAPPRLARPF--SAAWASTCHRHRRRRLR
                .**     *     *   *:        *    **::  *:  ..* ::*.  ::  :: 

AT5G66730.1     STGSGGSLLRGLGIVSTTSSSMELSNHDALSLAP----GLGLGLP-CSSGGSGSGLKELM
Os011706_Os03t0 RQGSSNS-------TTTITTKKPCKCHSRRVRCPNGRRGYSRSHPQCCPPGSASGY----
                  **..*       .:* ::.   . *.    .*    * . . * *.. **.**     

AT5G66730.1     MGNSSVFGPKQTTLDFLGLGRAVGNGGNTGGGLSALLTSIGGGGGIDLFGSGEFSGKDIG
Os011706_Os03t0 ----------HTT-----------------------------------------------
                          :**                                               

AT5G66730.1     RSS--
Os011706_Os03t0 RQAVR
                *.:
BoxShade v3.31 C (beta, 970507) Output
AT5G66730.1     M P V D L D N S S T V S G D A S V S S T G N Q N L - - - - - T P K S V G K K K R N L P G M P D P D A E V I A L S P K T L
Os011706_Os03t0    M E V E T S S G T A E R G - - - - A G A G A Q Q Q P P P Q P Q P Q P P A K K K R A L P G M P D P D A E V I A L S P K T L
 
AT5G66730.1     M A T N R F V C E I C N K G F Q R D Q N L Q L H R R G H N L P W K L R Q R S T K E V R K K V Y V C P V S G C V H H D P S
Os011706_Os03t0    L A T N R F V C E I C N K G F Q R D Q N L Q L H R R G H N L P W K L R Q R S G K E V R K R V Y V C P E P T C V H H D P S
 
AT5G66730.1     R A L G D L T G I K K H F C R K H G E K K W K C E K C S K K Y A V Q S D W K A H S K I C G T K E Y K C D C G T L F S R R
Os011706_Os03t0    R A L G D L T G I K K H F C R K H G E K K W K C D K C S K K Y A V Q S D W K A H T K T C G S R E Y R C D C G T L F S R R
 
AT5G66730.1     D S F I T H R A F C D A L A E E S A K N H T Q S K K L Y P E T V T R K N - - - - - P E I E Q K S P A A V E S S P S L P P
Os011706_Os03t0    D S F I T H R A F C D A L A E E S A K A R A A P P P P A D E D G T S A S A G A P P P Q A P L P P P A P V P A - - - - - P
 
AT5G66730.1     S S P P S V A I A P A P A I S V E T E S V K I I S - - - - - - - - - S S V L P I Q N S P E S Q E N N N H P E V I I E E A
Os011706_Os03t0    A P P P P P A A A P A P A A Q P E Q R A A A V A A W R R R R K A S L A A C L H R R R W P R R R S T R T - P S E L E R V A
 
AT5G66730.1     S R T I G F N V S S S D L S N D H S N N N G G Y A G L F V S S T A S P S L Y A S S - - - - - - - - - - - - - - - - T A S
Os011706_Os03t0    I R - - - - - - - - - - - - - - - - - - - - - - - - - - - S A R C L P S L R R C A S R P T R R R R C L R R L Y Q L T G S
 
AT5G66730.1     P S L - - - F A P S S S M E P I S L C L S T N P S L F G P T I R D P P H F L T P L P P Q P A M S A T A L L Q K A A Q M G
Os011706_Os03t0    S S L R R H R R P R R R T C P P R R C F R R - - - - - - P R R W A P P R L A R P F - - S A A W A S T C H R H R R R R L R
 
AT5G66730.1     S T G S G G S L L R G L G I V S T T S S S M E L S N H D A L S L A P - - - - G L G L G L P - C S S G G S G S G L K E L M
Os011706_Os03t0    R Q G S S N S - - - - - - - T T T I T T K K P C K C H S R R V R C P N G R R G Y S R S H P Q C C P P G S A S G Y - - - -
 
AT5G66730.1     M G N S S V F G P K Q T T L D F L G L G R A V G N G G N T G G G L S A L L T S I G G G G G I D L F G S G E F S G K D I G
Os011706_Os03t0    - - - - - - - - - - H T T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G66730.1     R S S - -
Os011706_Os03t0    R Q A V R
 
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