fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G66730.1 LSLAPGLGLGLPCSSG at 416/500 in AT5G66730.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb022090 not found in 676aa AT5G66730.1 1st_1st 0.484451718 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G66730.1     --MPVDLDNSSTVSGDA----------SVSSTGN--QNLTPKSVGKKKRNLPGMPDPDAE
Sb022090_Sorbi1 RSPPLALGRPFCESEDSGMEVETTPTTAVSSSGGAAQLPPPGPPAKKKRALPGMPDPDAE
                   *: *...   * *:          :***:*.  *  .* . .**** **********

AT5G66730.1     VIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPV
Sb022090_Sorbi1 VIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSGKEARKRVYVCPE
                *********:************************************* **.**:***** 

AT5G66730.1     SGCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTKEYKC
Sb022090_Sorbi1 PSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHVKTCGSREYRC
                ..*******************************:*************** * **::**:*

AT5G66730.1     DCGTLFSRRDSFITHRAFCDALAEESAKNHTQSKKLYPETVTRKNPEIEQKSPAAVESSP
Sb022090_Sorbi1 DCGTLFSRRDSFITHRAFCDALAEESAKARVEA------------PPAEDGSSAAAVVPP
                **************************** :.::            *  *: *.**.  .*

AT5G66730.1     SLPPSSPPSVAI---APAPAISVETESVKIISSSVLPIQNSPESQENNNHPEVIIEEASR
Sb022090_Sorbi1 PVPPPPPAPAPLRQQPPPPAPHHAEQRNEPEANATEPVQFAPPP------PQVPVPVLSQ
                .:**..*....:   .*.**     :  :  :.:. *:* :* .      *:* :   *:

AT5G66730.1     TIGFNVSSSDLSNDHSNNNGGYAGLFVSSTASPSLYASSTASPSLFAPSSSMEPISLCLS
Sb022090_Sorbi1 T---TVSAANVSASSSSTVAGTSQSLLGGMFAPSSMASAPQFPERALP---VKPPSLCLA
                *   .**::::* . *.. .* :  ::..  :**  **:.  *.   *   ::* ****:

AT5G66730.1     TN--PSLF-GPTIRDPPHFLTPLPPQPA----MSATALLQKAAQMGSTGSGGSLLRGLGI
Sb022090_Sorbi1 TDASSSIFSAPVSTERQQFAPPPPPSPSPSPHMSATTLLQKAAQMGATSSSSSFLRGLGL
                *:  .*:* .*.  :  :* .* **.*:    ****:*********:*.*..*:*****:

AT5G66730.1     VSTTSS---------------SMELSNHDAL--------------SLAPGLGLGLPCSSG
Sb022090_Sorbi1 DVSSSSPGASSSGQPQHHHEGAMQVSLPDASLPQWPPRLEHEPSPMLSAGLGLGLPYDST
                  ::**               :*::*  **                *:.******* .* 

AT5G66730.1     GSGSGLKELMMGNSSVFGPKQTTLDFLGLGRAVGNGGNTGGGLSALLTSIGGGGGIDLFG
Sb022090_Sorbi1 GAQVCLPELMMGQSSLFSGKPATLDFLGLGMS-PTGAPASRGIPAFIQPIGGAVGMAGTG
                *:   * *****:**:*. * :******** :  .*. :. *:.*:: .***. *:   *

AT5G66730.1     SGEFSGKDIGRSS---------------
Sb022090_Sorbi1 AGAAETFGAGRGPQATPWERNPSSSPIL
                :*  .  . **..
BoxShade v3.31 C (beta, 970507) Output
AT5G66730.1     - - M P V D L D N S S T V S G D A - - - - - - - - - - S V S S T G N - - Q N L T P K S V G K K K R N L P G M P D P D A E
Sb022090_Sorbi1    R S P P L A L G R P F C E S E D S G M E V E T T P T T A V S S S G G A A Q L P P P G P P A K K K R A L P G M P D P D A E
 
AT5G66730.1     V I A L S P K T L M A T N R F V C E I C N K G F Q R D Q N L Q L H R R G H N L P W K L R Q R S T K E V R K K V Y V C P V
Sb022090_Sorbi1    V I A L S P K T L L A T N R F V C E I C N K G F Q R D Q N L Q L H R R G H N L P W K L R Q R S G K E A R K R V Y V C P E
 
AT5G66730.1     S G C V H H D P S R A L G D L T G I K K H F C R K H G E K K W K C E K C S K K Y A V Q S D W K A H S K I C G T K E Y K C
Sb022090_Sorbi1    P S C V H H D P S R A L G D L T G I K K H F C R K H G E K K W K C D K C S K K Y A V Q S D W K A H V K T C G S R E Y R C
 
AT5G66730.1     D C G T L F S R R D S F I T H R A F C D A L A E E S A K N H T Q S K K L Y P E T V T R K N P E I E Q K S P A A V E S S P
Sb022090_Sorbi1    D C G T L F S R R D S F I T H R A F C D A L A E E S A K A R V E A - - - - - - - - - - - - P P A E D G S S A A A V V P P
 
AT5G66730.1     S L P P S S P P S V A I - - - A P A P A I S V E T E S V K I I S S S V L P I Q N S P E S Q E N N N H P E V I I E E A S R
Sb022090_Sorbi1    P V P P P P P A P A P L R Q Q P P P P A P H H A E Q R N E P E A N A T E P V Q F A P P P - - - - - - P Q V P V P V L S Q
 
AT5G66730.1     T I G F N V S S S D L S N D H S N N N G G Y A G L F V S S T A S P S L Y A S S T A S P S L F A P S S S M E P I S L C L S
Sb022090_Sorbi1    T - - - T V S A A N V S A S S S S T V A G T S Q S L L G G M F A P S S M A S A P Q F P E R A L P - - - V K P P S L C L A
 
AT5G66730.1     T N - - P S L F - G P T I R D P P H F L T P L P P Q P A - - - - M S A T A L L Q K A A Q M G S T G S G G S L L R G L G I
Sb022090_Sorbi1    T D A S S S I F S A P V S T E R Q Q F A P P P P P S P S P S P H M S A T T L L Q K A A Q M G A T S S S S S F L R G L G L
 
AT5G66730.1     V S T T S S - - - - - - - - - - - - - - - S M E L S N H D A L - - - - - - - - - - - - - - S L A P G L G L G L P C S S G
Sb022090_Sorbi1    D V S S S S P G A S S S G Q P Q H H H E G A M Q V S L P D A S L P Q W P P R L E H E P S P M L S A G L G L G L P Y D S T
 
AT5G66730.1     G S G S G L K E L M M G N S S V F G P K Q T T L D F L G L G R A V G N G G N T G G G L S A L L T S I G G G G G I D L F G
Sb022090_Sorbi1    G A Q V C L P E L M M G Q S S L F S G K P A T L D F L G L G M S - P T G A P A S R G I P A F I Q P I G G A V G M A G T G
 
AT5G66730.1     S G E F S G K D I G R S S - - - - - - - - - - - - - - -
Sb022090_Sorbi1    A G A A E T F G A G R G P Q A T P W E R N P S S S P I L
 
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