fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G66940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt002429 not found in 253aa AT3G50410.1 not_not 0.401084010 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G66940.1     MPSEFSESRRVPKIP-------HGQGGSVAIPTDQQEQLSCPRCESTNTKFCYYNNYNFS
pt002429_POPTR_ MPTELSSSEKTRRPPLSTTPTSNKPGGA---PPQEQEHLPCPRCDSTNTKFCYYNNYNFS
                **:*:*.*.:. : *       :  **:   *.::**:*.****:***************

AT5G66940.1     QPRHFCKSCRRYWTHGGTLRDIPVGGVSRKSSKRSRTYSSAATTSVVGS------RNFPL
pt002429_POPTR_ QPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKRSRT-SATTAASFAGPIIDNNIDNLPL
                ************************** :**.:***** *:::::*..*.       *:**

AT5G66940.1     QATPVLFPQSSSN------GGITTAKGS----ASSFYGGFSSLINYNAAVSRNGPG-GGF
pt002429_POPTR_ PATPVLVPLTASQGFSVHFGGGSDGKGNGGCGSGALGGSFTSLL--------NTPGPAGI
                 *****.* ::*:      ** : .**.    :.:: *.*:**:        * ** .*:

AT5G66940.1     NGPDAFGLGLGHGSYYEDVRYGQGITVWPFSSGATDAATTTSH-----IAQIPATWQFEG
pt002429_POPTR_ LALGRFGHGLGHG--LEDVGCGLGRGLWSFPGIGDSGAGVGGHGGVTVTAGLDNTWQF-G
                 . . ** *****   ***  * *  :*.*.. . ..* . .*      * :  **** *

AT5G66940.1     QESKVGFVSGDYVA--------------
pt002429_POPTR_ SAGQNGFVGGDCFSWPELAISTPANGFK
                . .: ***.** .:
BoxShade v3.31 C (beta, 970507) Output
AT5G66940.1     M P S E F S E S R R V P K I P - - - - - - - H G Q G G S V A I P T D Q Q E Q L S C P R C E S T N T K F C Y Y N N Y N F S
pt002429_POPTR_    M P T E L S S S E K T R R P P L S T T P T S N K P G G A - - - P P Q E Q E H L P C P R C D S T N T K F C Y Y N N Y N F S
 
AT5G66940.1     Q P R H F C K S C R R Y W T H G G T L R D I P V G G V S R K S S K R S R T Y S S A A T T S V V G S - - - - - - R N F P L
pt002429_POPTR_    Q P R H F C K S C R R Y W T H G G T L R D I P V G G G T R K N A K R S R T - S A T T A A S F A G P I I D N N I D N L P L
 
AT5G66940.1     Q A T P V L F P Q S S S N - - - - - - G G I T T A K G S - - - - A S S F Y G G F S S L I N Y N A A V S R N G P G - G G F
pt002429_POPTR_    P A T P V L V P L T A S Q G F S V H F G G G S D G K G N G G C G S G A L G G S F T S L L - - - - - - - - N T P G P A G I
 
AT5G66940.1     N G P D A F G L G L G H G S Y Y E D V R Y G Q G I T V W P F S S G A T D A A T T T S H - - - - - I A Q I P A T W Q F E G
pt002429_POPTR_    L A L G R F G H G L G H G - - L E D V G C G L G R G L W S F P G I G D S G A G V G G H G G V T V T A G L D N T W Q F - G
 
AT5G66940.1     Q E S K V G F V S G D Y V A - - - - - - - - - - - - - -
pt002429_POPTR_    S A G Q N G F V G G D C F S W P E L A I S T P A N G F K
 
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