fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G66940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os019543 not found in 206aa AT5G66940.1 1st_1st 0.287262872 Ib
Sb030237 not found in 304aa AT5G66940.1 1st_1st 0.284552845 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G66940.1     -------MPS------EFSESRRVP-----KIPHGQGGS--------VAIPTDQQEQLSC
Sb030237_Sorbi1 -EFSAAHIPS--------------------WIAH-QNGTHCMLGTWNEALPEPDEAALLK
Os019543_Os04t0 MAPAVASSPSLVLSAAAATASNKRPADSDASPPH-QGDR--------TGQQEKKQQQLEC
                        **                      .* *..          .    .:  *  

AT5G66940.1     PRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSR------------
Sb030237_Sorbi1 PEPLKTATRW-------HSVPRR-CPAEVEAGDVAPRAHEAPRGGASRCSVVPRREPVIK
Os019543_Os04t0 PRCRSTNTKFCYYNNYSTSQPRHFCRACRRYWTHGGTLRDVPVGGASR------------
                *.  .* *::        * **: * :  .    .   :: * **.**            

AT5G66940.1     -------K--SSKRSRTYSSAAT-----TSVVGSRN------------------------
Sb030237_Sorbi1 VRDHRLPRGGEGRRCKCNTAADVELREEAAVAEEREGGREVRQARVRERRSRQRRRRRRR
Os019543_Os04t0 -------RGGGGKRRRVSADAD--------------------------------------
                       :   .:* :  : *                                       

AT5G66940.1     ---------FPLQATPVLFPQSSSNGGI---TTAKGSASSFYGGFSSLINYNAAVSRNG-
Sb030237_Sorbi1 RGRGLGGDPAPLAAPAAGAARCAADGDVAQRAAVRPVAAARAAEVPRL--------RRAV
Os019543_Os04t0 ----------PSSASP---PPPT--------TSTTDAYADLPAGFPFL--------SDGA
                          *  *..   .  :        ::.    :   . .. *          . 

AT5G66940.1     ----PGGGFNG--PDAFGLG----------------LGHGSYYEDVRYGQGITVWPFSSG
Sb030237_Sorbi1 VVVVAELGVGGAAARALQLLLLPRLPALAHGLVALLLERGGVERELSVGIGRAL---GST
Os019543_Os04t0 --FLPQFGLAGVAPAAFSW--------------------ASAVPDL-YNCGIAPWDDGTA
                    .  *. *  . *:                      ..   ::  . * :    .: 

AT5G66940.1     ATDAA-TTTSHIAQIPATWQFEGQESKVGFVSGDYVA
Sb030237_Sorbi1 SGGGG-----------------GREDRSCRRH-----
Os019543_Os04t0 VTGAAWDNFADIAGLDLSWPPPGN-------------
                  ...                 *.
BoxShade v3.31 C (beta, 970507) Output
AT5G66940.1     - - - - - - - M P S - - - - - - E F S E S R R V P - - - - - K I P H G Q G G S - - - - - - - - V A I P T D Q Q E Q L S C
Sb030237_Sorbi1    - E F S A A H I P S - - - - - - - - - - - - - - - - - - - - W I A H - Q N G T H C M L G T W N E A L P E P D E A A L L K
Os019543_Os04t0    M A P A V A S S P S L V L S A A A A T A S N K R P A D S D A S P P H - Q G D R - - - - - - - - T G Q Q E K K Q Q Q L E C
 
AT5G66940.1     P R C E S T N T K F C Y Y N N Y N F S Q P R H F C K S C R R Y W T H G G T L R D I P V G G V S R - - - - - - - - - - - -
Sb030237_Sorbi1    P E P L K T A T R W - - - - - - - H S V P R R - C P A E V E A G D V A P R A H E A P R G G A S R C S V V P R R E P V I K
Os019543_Os04t0    P R C R S T N T K F C Y Y N N Y S T S Q P R H F C R A C R R Y W T H G G T L R D V P V G G A S R - - - - - - - - - - - -
 
AT5G66940.1     - - - - - - - K - - S S K R S R T Y S S A A T - - - - - T S V V G S R N - - - - - - - - - - - - - - - - - - - - - - - -
Sb030237_Sorbi1    V R D H R L P R G G E G R R C K C N T A A D V E L R E E A A V A E E R E G G R E V R Q A R V R E R R S R Q R R R R R R R
Os019543_Os04t0    - - - - - - - R G G G G K R R R V S A D A D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G66940.1     - - - - - - - - - F P L Q A T P V L F P Q S S S N G G I - - - T T A K G S A S S F Y G G F S S L I N Y N A A V S R N G -
Sb030237_Sorbi1    R G R G L G G D P A P L A A P A A G A A R C A A D G D V A Q R A A V R P V A A A R A A E V P R L - - - - - - - - R R A V
Os019543_Os04t0    - - - - - - - - - - P S S A S P - - - P P P T - - - - - - - - T S T T D A Y A D L P A G F P F L - - - - - - - - S D G A
 
AT5G66940.1     - - - - P G G G F N G - - P D A F G L G - - - - - - - - - - - - - - - - L G H G S Y Y E D V R Y G Q G I T V W P F S S G
Sb030237_Sorbi1    V V V V A E L G V G G A A A R A L Q L L L L P R L P A L A H G L V A L L L E R G G V E R E L S V G I G R A L - - - G S T
Os019543_Os04t0    - - F L P Q F G L A G V A P A A F S W - - - - - - - - - - - - - - - - - - - - A S A V P D L - Y N C G I A P W D D G T A
 
AT5G66940.1     A T D A A - T T T S H I A Q I P A T W Q F E G Q E S K V G F V S G D Y V A
Sb030237_Sorbi1    S G G G G - - - - - - - - - - - - - - - - - G R E D R S C R R H - - - - -
Os019543_Os04t0    V T G A A W D N F A D I A G L D L S W P P P G N - - - - - - - - - - - - -
 
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