fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G66940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os019543 not found in 206aa AT5G66940.1 1st_1st 0.287262872 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G66940.1     -------MPS------EFSESRRVP-----KIPHGQGGSVAIPTDQQEQLSCPRCESTNT
Os019543_Os04t0 MAPAVASSPSLVLSAAAATASNKRPADSDASPPH-QGDRTGQQEKKQQQLECPRCRSTNT
                        **        : *.: *     . ** **. ..   .:*:**.****.****

AT5G66940.1     KFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRK--SSKRSRTYSSAATTSVV
Os019543_Os04t0 KFCYYNNYSTSQPRHFCRACRRYWTHGGTLRDVPVGGASRRGGGGKRRRVSADAD-----
                ********. *******::*************:****.**:  ..** *. :.*      

AT5G66940.1     GSRNFPLQATPVLFPQSSSNGGITTAKGSASSFYGGFSSLINYNAAVSRNG---PGGGFN
Os019543_Os04t0 -----PSSASP---PPPT-----TSTTDAYADLPAGFPFL--------SDGAFLPQFGLA
                     * .*:*   * .:     *::..: :.: .**. *         :*   *  *: 

AT5G66940.1     G--PDAFGLGLGHGSYYEDVRYGQGITVWPFSSGATDAA-TTTSHIAQIPATWQFEGQES
Os019543_Os04t0 GVAPAAFSW----ASAVPDL-YNCGIAPWDDGTAVTGAAWDNFADIAGLDLSWPPPGN--
                *  * **.     .*   *: *. **: *  .:..*.**  . :.** :  :*   *:  

AT5G66940.1     KVGFVSGDYVA
Os019543_Os04t0 -----------
BoxShade v3.31 C (beta, 970507) Output
AT5G66940.1     - - - - - - - M P S - - - - - - E F S E S R R V P - - - - - K I P H G Q G G S V A I P T D Q Q E Q L S C P R C E S T N T
Os019543_Os04t0    M A P A V A S S P S L V L S A A A A T A S N K R P A D S D A S P P H - Q G D R T G Q Q E K K Q Q Q L E C P R C R S T N T
 
AT5G66940.1     K F C Y Y N N Y N F S Q P R H F C K S C R R Y W T H G G T L R D I P V G G V S R K - - S S K R S R T Y S S A A T T S V V
Os019543_Os04t0    K F C Y Y N N Y S T S Q P R H F C R A C R R Y W T H G G T L R D V P V G G A S R R G G G G K R R R V S A D A D - - - - -
 
AT5G66940.1     G S R N F P L Q A T P V L F P Q S S S N G G I T T A K G S A S S F Y G G F S S L I N Y N A A V S R N G - - - P G G G F N
Os019543_Os04t0    - - - - - P S S A S P - - - P P P T - - - - - T S T T D A Y A D L P A G F P F L - - - - - - - - S D G A F L P Q F G L A
 
AT5G66940.1     G - - P D A F G L G L G H G S Y Y E D V R Y G Q G I T V W P F S S G A T D A A - T T T S H I A Q I P A T W Q F E G Q E S
Os019543_Os04t0    G V A P A A F S W - - - - A S A V P D L - Y N C G I A P W D D G T A V T G A A W D N F A D I A G L D L S W P P P G N - -
 
AT5G66940.1     K V G F V S G D Y V A
Os019543_Os04t0    - - - - - - - - - - -
 
0