fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G66940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb030237 not found in 304aa AT5G66940.1 1st_1st 0.284552845 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G66940.1     MPSEFSESRRVPKIPHGQGGSV-------AIPTDQQEQLSCPRCESTNTKFCYYNNYNFS
Sb030237_Sorbi1 ---EFSAAHIPSWIAHQNGTHCMLGTWNEALPEPDEAALLKPEPLKTATRW-------HS
                   *** ::  . *.* :*          *:*  ::  *  *.  .* *::       .*

AT5G66940.1     QPRHFCKSCRRYWTHGGTLRDIPVGGVSRKSSKRSRTYSSAATTSVVGSRNFPLQATPVL
Sb030237_Sorbi1 VPRR-CPA------------EVEAGDVAPRAHEAPR--GGASRCSVVPRREPVIKVRDHR
                 **: * :            :: .*.*: :: : .*  ..*:  ***  *:  ::.    

AT5G66940.1     FPQSSSNGGITTAKGSASSFYGGFSSLINYNAAVSRNGPGG-------------------
Sb030237_Sorbi1 LPR----GG----EGRRCKCNTAADVELREEAAVAEEREGGREVRQARVRERRSRQRRRR
                :*:    **    :*  ..   . .  :. :***:.:  **                   

AT5G66940.1     ------GFNG-------PDAFGLGLGHGSYYEDVRYGQGITVWPFSS-------------
Sb030237_Sorbi1 RRRRGRGLGGDPAPLAAPAA-----GAARCAADGDVAQRAAVRPVAAARAAEVPRLRRAV
                      *:.*       * *     * .    *   .*  :* *.::             

AT5G66940.1     ----------GATDAATTTSHIAQIPA--------TWQFEGQESKVGFVSGDYVA-----
Sb030237_Sorbi1 VVVVAELGVGGAAARALQLLLLPRLPALAHGLVALLLERGGVERELSVGIGRALGSTSGG
                          **:  *     :.::**          :  * * ::..  *  :.     

AT5G66940.1     ------------
Sb030237_Sorbi1 GGGREDRSCRRH
BoxShade v3.31 C (beta, 970507) Output
AT5G66940.1     M P S E F S E S R R V P K I P H G Q G G S V - - - - - - - A I P T D Q Q E Q L S C P R C E S T N T K F C Y Y N N Y N F S
Sb030237_Sorbi1    - - - E F S A A H I P S W I A H Q N G T H C M L G T W N E A L P E P D E A A L L K P E P L K T A T R W - - - - - - - H S
 
AT5G66940.1     Q P R H F C K S C R R Y W T H G G T L R D I P V G G V S R K S S K R S R T Y S S A A T T S V V G S R N F P L Q A T P V L
Sb030237_Sorbi1    V P R R - C P A - - - - - - - - - - - - E V E A G D V A P R A H E A P R - - G G A S R C S V V P R R E P V I K V R D H R
 
AT5G66940.1     F P Q S S S N G G I T T A K G S A S S F Y G G F S S L I N Y N A A V S R N G P G G - - - - - - - - - - - - - - - - - - -
Sb030237_Sorbi1    L P R - - - - G G - - - - E G R R C K C N T A A D V E L R E E A A V A E E R E G G R E V R Q A R V R E R R S R Q R R R R
 
AT5G66940.1     - - - - - - G F N G - - - - - - - P D A F G L G L G H G S Y Y E D V R Y G Q G I T V W P F S S - - - - - - - - - - - - -
Sb030237_Sorbi1    R R R R G R G L G G D P A P L A A P A A - - - - - G A A R C A A D G D V A Q R A A V R P V A A A R A A E V P R L R R A V
 
AT5G66940.1     - - - - - - - - - - G A T D A A T T T S H I A Q I P A - - - - - - - - T W Q F E G Q E S K V G F V S G D Y V A - - - - -
Sb030237_Sorbi1    V V V V A E L G V G G A A A R A L Q L L L L P R L P A L A H G L V A L L L E R G G V E R E L S V G I G R A L G S T S G G
 
AT5G66940.1     - - - - - - - - - - - -
Sb030237_Sorbi1    G G G R E D R S C R R H
 
0