fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G67180.1 TRNGHNLGLSLGESSS at 264/352 in AT5G67180.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os015562 MLLDLNVESPERSGT in 3/430 AT4G36920.1 not_not 0.402317880 III
AIVDGDLDLDLRISQP in 284/430
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G67180.1     -MWNLN-DSPDHHEES--------DSRGNPVGHVSNGM---------------SQSATWL
Os015562_Os03t0 MLLDLNVESPERSGTSSSSVLNSGDAGGGGGGGGGGGLFRFDLLASSPDDDECSGEQHQL
                 : :** :**::   *        *: *.  *  ..*:               * .   *

AT5G67180.1     PFVLP-VTRNFF---------PAQSMEPGVRWSGFNSVGKSDPSGSGRPEEPEISPPIKK
Os015562_Os03t0 PAASGIVTRQLLPPPPPAAPSPAPAWQPPRR-------AAEDAALAQRPVVA------KK
                * .   ***:::         ** : :*  *       . .*.: : **  .      **

AT5G67180.1     SRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGV
Os015562_Os03t0 TRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGL
                :**********************************************************:

AT5G67180.1     DADINFDIEDYLDDLKQMGNLTKEEFMHVLRRQSTGFPRGSSKYRGVTLHKCGRWESRLG
Os015562_Os03t0 EADINFNLSDYEDDLKQMRNWTKEEFVHILRRQSTGFARGSSKFRGVTLHKCGRWEARMG
                :*****::.** ****** * *****:*:********.*****:************:*:*

AT5G67180.1     QFLNKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAVTNFDPKVYEEEE--DLSSETTRNG
Os015562_Os03t0 QLLGKKYIYLGLFDTEVEAAR----AAIRFNGREAVTNFEPASYNVDALPDAGNEAIVDG
                *:*.***:********:****    ***: **::*****:*  *: :   * ..*:  :*

AT5G67180.1     HNLGLSLGESSSEEFRLKSDIASI------------------------------------
Os015562_Os03t0 -DLDLDLRISQPNARDSKSDVATTGLQLTCDSPESSNITVHQPMGSSPQWTVHHQSTPLP
                 :*.*.*  *..:    ***:*:                                     

AT5G67180.1     --RSRIRD----------EERLLGSDLSLAMMTTTVRSEKQQSDGGGNRVVGMAASSGFS
Os015562_Os03t0 PQHQRLYPSHCLGFLPNLQERPMDRRPELGPMPFPTQAWQMQAP-SHLPLLHAAASSGFS
                  :.*:            :** :.   .*. *. ..:: : *:  .   ::  *******

AT5G67180.1     P------------QPSPYRIPRTFHFSRP--
Os015562_Os03t0 AGAGAGVAAATRRQP-PFPADHPFYFP-PTA
                .            ** *:   :.*:*. *
BoxShade v3.31 C (beta, 970507) Output
AT5G67180.1     - M W N L N - D S P D H H E E S - - - - - - - - D S R G N P V G H V S N G M - - - - - - - - - - - - - - - S Q S A T W L
Os015562_Os03t0    M L L D L N V E S P E R S G T S S S S V L N S G D A G G G G G G G G G G G L F R F D L L A S S P D D D E C S G E Q H Q L
 
AT5G67180.1     P F V L P - V T R N F F - - - - - - - - - P A Q S M E P G V R W S G F N S V G K S D P S G S G R P E E P E I S P P I K K
Os015562_Os03t0    P A A S G I V T R Q L L P P P P P A A P S P A P A W Q P P R R - - - - - - - A A E D A A L A Q R P V V A - - - - - - K K
 
AT5G67180.1     S R R G P R S R S S Q Y R G V T F Y R R T G R W E S H I W D C G K Q V Y L G G F D T A H A A A R A Y D R A A I K F R G V
Os015562_Os03t0    T R R G P R S R S S Q Y R G V T F Y R R T G R W E S H I W D C G K Q V Y L G G F D T A H A A A R A Y D R A A I K F R G L
 
AT5G67180.1     D A D I N F D I E D Y L D D L K Q M G N L T K E E F M H V L R R Q S T G F P R G S S K Y R G V T L H K C G R W E S R L G
Os015562_Os03t0    E A D I N F N L S D Y E D D L K Q M R N W T K E E F V H I L R R Q S T G F A R G S S K F R G V T L H K C G R W E A R M G
 
AT5G67180.1     Q F L N K K Y V Y L G L F D T E I E A A R A Y D K A A I K C N G K D A V T N F D P K V Y E E E E - - D L S S E T T R N G
Os015562_Os03t0    Q L L G K K Y I Y L G L F D T E V E A A R - - - - A A I R F N G R E A V T N F E P A S Y N V D A L P D A G N E A I V D G
 
AT5G67180.1     H N L G L S L G E S S S E E F R L K S D I A S I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os015562_Os03t0    - D L D L D L R I S Q P N A R D S K S D V A T T G L Q L T C D S P E S S N I T V H Q P M G S S P Q W T V H H Q S T P L P
 
AT5G67180.1     - - R S R I R D - - - - - - - - - - E E R L L G S D L S L A M M T T T V R S E K Q Q S D G G G N R V V G M A A S S G F S
Os015562_Os03t0    P Q H Q R L Y P S H C L G F L P N L Q E R P M D R R P E L G P M P F P T Q A W Q M Q A P - S H L P L L H A A A S S G F S
 
AT5G67180.1     P - - - - - - - - - - - - Q P S P Y R I P R T F H F S R P - -
Os015562_Os03t0    A G A G A G V A A A T R R Q P - P F P A D H P F Y F P - P T A
 
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