fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G67180.1 TRNGHNLGLSLGESSS at 264/352 in AT5G67180.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb004977 LESMVLDLNAESPTAGSA in 76/539 AT4G36920.1 not_not 0.427152317 III
Sb019932 GAEMVLDLNVASPADSGT in 93/630 AT4G36920.1 not_not 0.422185430 III
RDAIDLDLRISQPNVQDP in 378/630
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G67180.1     ------------------------------------------------------------
Sb019932_Sorbi1 --------------------------------------------------------AGGG
Sb004977_Sorbi1 MASPAIPFAPLTSHRAVPFVLGCPPPWPPRPPPAAPGRPPRPDAAAAARLLEEEARAGSS
                                                                            

AT5G67180.1     --------------MWNLN-DSPDHHEESDSR--------------GNPVGHVSNGMSQS
Sb019932_Sorbi1 LWEAPAG-PGAE-MVLDLNVASPADSGTSSSSVLNSANGGFRFGLLGSPVD--DDDCSGE
Sb004977_Sorbi1 RARSPAGRPELESMVLDLNAESPTAGSASATS---SSSGVFRFDLLGGTPD--EEGCS--
                              : :**  **     * :               *.. .  .:. *  

AT5G67180.1     ATWLPFVLPVTRNFFPAQS-----MEPGVR--------------WSGFNSVGKSDPS---
Sb019932_Sorbi1 MAPGASTGFMTRQLFPSPTPP---AEP------EPEPPAAPVPVWQPRRAEDL-------
Sb004977_Sorbi1 ----PSPPVVTRQLFPLPSYPDAAAAPTAASNGSPPPPQAAGP-WA-RRAADLVAPALGQ
                    .    :**::**  :       *                 *   .: .        

AT5G67180.1     --GSGRPEEP-------EISPPI-KKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQ
Sb019932_Sorbi1 ----GVAQRP--------VAPA--KKTRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQ
Sb004977_Sorbi1 GQGQGAVVMPAPSSPPAAVSPAAGKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQ
                    *    *        ::*.  **:*********************************

AT5G67180.1     VYLGGFDTAHAAARAYDRAAIKFRGVDADINFDIEDYLDDLKQMGNLTKEEFMHVLRRQS
Sb019932_Sorbi1 VYLGGFDTAHAAARAYDRAAIKFRGLEADINFSLGDYEDDLKQMRNWTKEEFVHILRRQS
Sb004977_Sorbi1 VYLGGFDTAHAAARAYDRAAIKFRGLDADINFQLKDYEDDLKQMKNWTKEEFVHILRRQS
                *************************::*****.: ** ****** * *****:*:*****

AT5G67180.1     TGFPRGSSKYRGVTLHKCGRWESRLGQFLNKKYVYLGLFDTEIEAARAYDKAAIKCNGKD
Sb019932_Sorbi1 TGFARGSSKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEVEAARAYDRAALRFNGRE
Sb004977_Sorbi1 TGFARGSSKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEIEAARAYDRAAIRFNGPD
                ***.******************:*:**:*.***:******:*:*******:**:: ** :

AT5G67180.1     AVTNFDPKVYE-----------------------------EEEDLSSETTRNGHNLGLSL
Sb019932_Sorbi1 AVTNFEPSSYNAGDNSLPDTETEAIVDRDAIDLDLRISQPNVQDPKRDYTLTSLQPTCDS
Sb004977_Sorbi1 AVTNFDSSSYD-GDVPLPTAIEKDVVDGDILDLNLRISQPNVHDLKSDGTLTGFGLGCNS
                *****:.. *:                             : .* . : * ..     . 

AT5G67180.1     GESSSEEFRLKSDIASIRSRIRDEE-----------------RLLGSD---------LSL
Sb019932_Sorbi1 PESSN----------TMASQPMSSSSPWPGYQQNPAVSSHHQHLYSSACHGSFPNHQVQE
Sb004977_Sorbi1 PEASS----------SIVSQPISPQ--WPVHPHSTPMQLQHPHLYASPCPGFFVN--LRE
                 *:*.          :: *:  . .                 :* .*          :  

AT5G67180.1     AMMTTTVRSEKQ-----------QSDGGGNRVVGM---AASSGFSPQ-------------
Sb019932_Sorbi1 RPME---RRPELGAQP-FPTWAWQTQGS--PHVPLHHSAASSGFSTAA---GANGGMPLP
Sb004977_Sorbi1 APMEEEKRAERAGPEPAFPSWAWQTQGSPAPFLPATATAASSGFSTAATTTGVDAATAAR
                  *    *  .            *::*.    :     *******.              

AT5G67180.1     ---PS----P----------YRIPRTFHFSRP
Sb019932_Sorbi1 SHPPA----P------------FPTTNPFFFP
Sb004977_Sorbi1 SVPPSLSGGPRQLFSGYQLQLRFPPTA-----
                   *:    *            :* *
BoxShade v3.31 C (beta, 970507) Output
AT5G67180.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb019932_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A G G G
Sb004977_Sorbi1    M A S P A I P F A P L T S H R A V P F V L G C P P P W P P R P P P A A P G R P P R P D A A A A A R L L E E E A R A G S S
 
AT5G67180.1     - - - - - - - - - - - - - - M W N L N - D S P D H H E E S D S R - - - - - - - - - - - - - - G N P V G H V S N G M S Q S
Sb019932_Sorbi1    L W E A P A G - P G A E - M V L D L N V A S P A D S G T S S S S V L N S A N G G F R F G L L G S P V D - - D D D C S G E
Sb004977_Sorbi1    R A R S P A G R P E L E S M V L D L N A E S P T A G S A S A T S - - - S S S G V F R F D L L G G T P D - - E E G C S - -
 
AT5G67180.1     A T W L P F V L P V T R N F F P A Q S - - - - - M E P G V R - - - - - - - - - - - - - - W S G F N S V G K S D P S - - -
Sb019932_Sorbi1    M A P G A S T G F M T R Q L F P S P T P P - - - A E P - - - - - - E P E P P A A P V P V W Q P R R A E D L - - - - - - -
Sb004977_Sorbi1    - - - - P S P P V V T R Q L F P L P S Y P D A A A A P T A A S N G S P P P P Q A A G P - W A - R R A A D L V A P A L G Q
 
AT5G67180.1     - - G S G R P E E P - - - - - - - E I S P P I - K K S R R G P R S R S S Q Y R G V T F Y R R T G R W E S H I W D C G K Q
Sb019932_Sorbi1    - - - - G V A Q R P - - - - - - - - V A P A - - K K T R R G P R S R S S Q Y R G V T F Y R R T G R W E S H I W D C G K Q
Sb004977_Sorbi1    G Q G Q G A V V M P A P S S P P A A V S P A A G K K S R R G P R S R S S Q Y R G V T F Y R R T G R W E S H I W D C G K Q
 
AT5G67180.1     V Y L G G F D T A H A A A R A Y D R A A I K F R G V D A D I N F D I E D Y L D D L K Q M G N L T K E E F M H V L R R Q S
Sb019932_Sorbi1    V Y L G G F D T A H A A A R A Y D R A A I K F R G L E A D I N F S L G D Y E D D L K Q M R N W T K E E F V H I L R R Q S
Sb004977_Sorbi1    V Y L G G F D T A H A A A R A Y D R A A I K F R G L D A D I N F Q L K D Y E D D L K Q M K N W T K E E F V H I L R R Q S
 
AT5G67180.1     T G F P R G S S K Y R G V T L H K C G R W E S R L G Q F L N K K Y V Y L G L F D T E I E A A R A Y D K A A I K C N G K D
Sb019932_Sorbi1    T G F A R G S S K Y R G V T L H K C G R W E A R M G Q L L G K K Y I Y L G L F D S E V E A A R A Y D R A A L R F N G R E
Sb004977_Sorbi1    T G F A R G S S K Y R G V T L H K C G R W E A R M G Q L L G K K Y I Y L G L F D S E I E A A R A Y D R A A I R F N G P D
 
AT5G67180.1     A V T N F D P K V Y E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E E E D L S S E T T R N G H N L G L S L
Sb019932_Sorbi1    A V T N F E P S S Y N A G D N S L P D T E T E A I V D R D A I D L D L R I S Q P N V Q D P K R D Y T L T S L Q P T C D S
Sb004977_Sorbi1    A V T N F D S S S Y D - G D V P L P T A I E K D V V D G D I L D L N L R I S Q P N V H D L K S D G T L T G F G L G C N S
 
AT5G67180.1     G E S S S E E F R L K S D I A S I R S R I R D E E - - - - - - - - - - - - - - - - - R L L G S D - - - - - - - - - L S L
Sb019932_Sorbi1    P E S S N - - - - - - - - - - T M A S Q P M S S S S P W P G Y Q Q N P A V S S H H Q H L Y S S A C H G S F P N H Q V Q E
Sb004977_Sorbi1    P E A S S - - - - - - - - - - S I V S Q P I S P Q - - W P V H P H S T P M Q L Q H P H L Y A S P C P G F F V N - - L R E
 
AT5G67180.1     A M M T T T V R S E K Q - - - - - - - - - - - Q S D G G G N R V V G M - - - A A S S G F S P Q - - - - - - - - - - - - -
Sb019932_Sorbi1    R P M E - - - R R P E L G A Q P - F P T W A W Q T Q G S - - P H V P L H H S A A S S G F S T A A - - - G A N G G M P L P
Sb004977_Sorbi1    A P M E E E K R A E R A G P E P A F P S W A W Q T Q G S P A P F L P A T A T A A S S G F S T A A T T T G V D A A T A A R
 
AT5G67180.1     - - - P S - - - - P - - - - - - - - - - Y R I P R T F H F S R P
Sb019932_Sorbi1    S H P P A - - - - P - - - - - - - - - - - - F P T T N P F F F P
Sb004977_Sorbi1    S V P P S L S G G P R Q L F S G Y Q L Q L R F P P T A - - - - -
 
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