fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G67180.1 TRNGHNLGLSLGESSS at 264/352 in AT5G67180.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb030095 GDDEHNLDLSLGSSAG in 299/614 AT4G36920.1 1st_not 0.465231788 II
Sb004977 LESMVLDLNAESPTAGSA in 76/539 AT4G36920.1 not_not 0.427152317 III
Sb019932 GAEMVLDLNVASPADSGT in 93/630 AT4G36920.1 not_not 0.422185430 III
RDAIDLDLRISQPNVQDP in 378/630
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G67180.1     -------------------------MW--------------------------------N
Sb019932_Sorbi1 --------------------------------------------------------AGGG
Sb004977_Sorbi1 MASPAIPFAPLTSHRAVPFVLGCPPPWPPRPPPAAPGRPPRPDAAAAARLLEEEARAGSS
Sb030095_Sorbi1 -------------------------MW--------------------------------D
                                                                           .

AT5G67180.1     LNDSPDHHEESD------SRGNPVGHVSNGMS---QSATWLPFVLP--------------
Sb019932_Sorbi1 LWEAPAG-PGAE-MVLDLNVASPADSGTSSSSVLNSANGGFRFGLLGSPVDDDDCSGEMA
Sb004977_Sorbi1 RARSPAGRPELESMVLDLNAESPTAGSASATS---SSSGVFRFDLLGGTPDEEGCS----
Sb030095_Sorbi1 LNDSPAAPPPSP------SADD------SGAS---SSSAAAPVEIPDDA-DDDSTA----
                   :*             .  .      .. *   .:     . :               

AT5G67180.1     -------VTRNFFPAQ---------------SMEPGVR----WSGFNSVGKSDPS-----
Sb019932_Sorbi1 PGASTGFMTRQLFPSPTPP---AEP------EPEPPAAPVPVWQPRRAEDL---------
Sb004977_Sorbi1 --PSPPVVTRQLFPLPSYPDAAAAPTAASNGSPPPPQAAGP-WA-RRAADLVAPALGQGQ
Sb030095_Sorbi1 --AAAAVVTRQFFPAPAAI--GAAP----AGSSNARAG----WLRLSAAAPPPAA-----
                       :**::**                 .  .       *    :            

AT5G67180.1     GSGRPEEP-------EISPPI----------KKSRRGPRSRSSQYRGVTFYRRTGRWESH
Sb019932_Sorbi1 --GVAQRP--------VAPA-----------KKTRRGPRSRSSQYRGVTFYRRTGRWESH
Sb004977_Sorbi1 GQGAVVMPAPSSPPAAVSPAA---------GKKSRRGPRSRSSQYRGVTFYRRTGRWESH
Sb030095_Sorbi1 GSNGGVAP-------AGGPAAGSAATAAAGGKKSRRGPRSRSSQYRGVTFYRRTGRWESH
                  .    *         .*.           **:**************************

AT5G67180.1     IWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFDIEDYLDDLK-QMGNLTKEEF
Sb019932_Sorbi1 IWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLEADINFSLGDYEDDLK-QMRNWTKEEF
Sb004977_Sorbi1 IWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFQLKDYEDDLK-QMKNWTKEEF
Sb030095_Sorbi1 IWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFSLEDYQDDMKQQMGHLSKEEF
                ********************************::*****.: ** **:* ** : :****

AT5G67180.1     MHVLRRQSTGFPRGSSKYRGVTLHKCGRWESRLGQFLNKKYVYLGLFDTEIEAARAYDKA
Sb019932_Sorbi1 VHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEVEAARAYDRA
Sb004977_Sorbi1 VHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEIEAARAYDRA
Sb030095_Sorbi1 VHVLRRQSTGFPRGSSKFRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEEEAARAYDRA
                :*:********.*****:************:*:**:*.***:******:* *******:*

AT5G67180.1     AIKCNGKDAVTNFDPKVYEEEEDLSSET------TRNGHNLGLSLG--------------
Sb019932_Sorbi1 ALRFNGREAVTNFEPSSYNAGDNSLPDT--ETEAIVDRDAIDLDLRISQPNVQDPKRDYT
Sb004977_Sorbi1 AIRFNGPDAVTNFDSSSYD-GDVPLPTA--IEKDVVDGDILDLNLRISQPNVHDLKSDGT
Sb030095_Sorbi1 AIKCNGKDAVTNFDPSIYAEELEPAASTGGGSGGGDDEHNLDLSLGSSAGN-----KRGS
                *:: ** :*****:.. *       . :        : . :.*.*               

AT5G67180.1     -----------ESSSEEFRLKSDI-------ASIRSRI----------------------
Sb019932_Sorbi1 LTSLQPTCDSPESSNT----------MASQPMSSSSPW-----------PGYQQNPAVS-
Sb004977_Sorbi1 LTGFGLGCNSPEASSS----------IVSQPISPQ--W-----------PVHPHSTPMQ-
Sb030095_Sorbi1 LDGGGGG--DDETSDQRVPMAFDIDWQTAAPRSTKAKLDASSKQPQMLPPPLPPPPALQV
                           *:*.                 *                           

AT5G67180.1     ----------RDEERLLGSD--------LSLAM-----------MTTTVRSEKQQ-----
Sb019932_Sorbi1 ----------SHHQHLYSSA-------------------CHGSFPNHQVQERPME---RR
Sb004977_Sorbi1 ----------LQHPHLYASP-------------------CPGFFVN--LREAPMEEEKRA
Sb030095_Sorbi1 AHHLPLPFSPRHPQRQFLSNGDPGTAGGLSLAIGGAGGGGGGGHWTPQLQHQQQHHQQR-
                           .  :   *                          .  ::    .     

AT5G67180.1     --------------SDGGGNR-------------VVGMAASSGFSPQ-------------
Sb019932_Sorbi1 PELGAQP-FPTWAWQTQGS------PHVP-----LHHSAASSGFSTAA---GANGGMPLP
Sb004977_Sorbi1 ERAGPEPAFPSWAWQTQGSPA----PFLP-----ATATAASSGFSTAATTTGVDAATAAR
Sb030095_Sorbi1 --------LHGGVWANGGGTSWPPPPHPPPPTTAATAAAASSRFPPYVVT----------
                                 *.                   **** *..              

AT5G67180.1     ---PS----PYRIPRTFH--FSRP--------
Sb019932_Sorbi1 SHPPA----P------------FPTTNPFFFP
Sb004977_Sorbi1 SVPPSLSGGPRQLFSGYQLQLRFPPTA-----
Sb030095_Sorbi1 TQGPA----GWVQKNGFH-SLARPT-------
                   *:                  *
BoxShade v3.31 C (beta, 970507) Output
AT5G67180.1     - - - - - - - - - - - - - - - - - - - - - - - - - M W - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N
Sb019932_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A G G G
Sb004977_Sorbi1    M A S P A I P F A P L T S H R A V P F V L G C P P P W P P R P P P A A P G R P P R P D A A A A A R L L E E E A R A G S S
Sb030095_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - M W - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D
 
AT5G67180.1     L N D S P D H H E E S D - - - - - - S R G N P V G H V S N G M S - - - Q S A T W L P F V L P - - - - - - - - - - - - - -
Sb019932_Sorbi1    L W E A P A G - P G A E - M V L D L N V A S P A D S G T S S S S V L N S A N G G F R F G L L G S P V D D D D C S G E M A
Sb004977_Sorbi1    R A R S P A G R P E L E S M V L D L N A E S P T A G S A S A T S - - - S S S G V F R F D L L G G T P D E E G C S - - - -
Sb030095_Sorbi1    L N D S P A A P P P S P - - - - - - S A D D - - - - - - S G A S - - - S S S A A A P V E I P D D A - D D D S T A - - - -
 
AT5G67180.1     - - - - - - - V T R N F F P A Q - - - - - - - - - - - - - - - S M E P G V R - - - - W S G F N S V G K S D P S - - - - -
Sb019932_Sorbi1    P G A S T G F M T R Q L F P S P T P P - - - A E P - - - - - - E P E P P A A P V P V W Q P R R A E D L - - - - - - - - -
Sb004977_Sorbi1    - - P S P P V V T R Q L F P L P S Y P D A A A A P T A A S N G S P P P P Q A A G P - W A - R R A A D L V A P A L G Q G Q
Sb030095_Sorbi1    - - A A A A V V T R Q F F P A P A A I - - G A A P - - - - A G S S N A R A G - - - - W L R L S A A A P P P A A - - - - -
 
AT5G67180.1     G S G R P E E P - - - - - - - E I S P P I - - - - - - - - - - K K S R R G P R S R S S Q Y R G V T F Y R R T G R W E S H
Sb019932_Sorbi1    - - G V A Q R P - - - - - - - - V A P A - - - - - - - - - - - K K T R R G P R S R S S Q Y R G V T F Y R R T G R W E S H
Sb004977_Sorbi1    G Q G A V V M P A P S S P P A A V S P A A - - - - - - - - - G K K S R R G P R S R S S Q Y R G V T F Y R R T G R W E S H
Sb030095_Sorbi1    G S N G G V A P - - - - - - - A G G P A A G S A A T A A A G G K K S R R G P R S R S S Q Y R G V T F Y R R T G R W E S H
 
AT5G67180.1     I W D C G K Q V Y L G G F D T A H A A A R A Y D R A A I K F R G V D A D I N F D I E D Y L D D L K - Q M G N L T K E E F
Sb019932_Sorbi1    I W D C G K Q V Y L G G F D T A H A A A R A Y D R A A I K F R G L E A D I N F S L G D Y E D D L K - Q M R N W T K E E F
Sb004977_Sorbi1    I W D C G K Q V Y L G G F D T A H A A A R A Y D R A A I K F R G L D A D I N F Q L K D Y E D D L K - Q M K N W T K E E F
Sb030095_Sorbi1    I W D C G K Q V Y L G G F D T A H A A A R A Y D R A A I K F R G V E A D I N F S L E D Y Q D D M K Q Q M G H L S K E E F
 
AT5G67180.1     M H V L R R Q S T G F P R G S S K Y R G V T L H K C G R W E S R L G Q F L N K K Y V Y L G L F D T E I E A A R A Y D K A
Sb019932_Sorbi1    V H I L R R Q S T G F A R G S S K Y R G V T L H K C G R W E A R M G Q L L G K K Y I Y L G L F D S E V E A A R A Y D R A
Sb004977_Sorbi1    V H I L R R Q S T G F A R G S S K Y R G V T L H K C G R W E A R M G Q L L G K K Y I Y L G L F D S E I E A A R A Y D R A
Sb030095_Sorbi1    V H V L R R Q S T G F P R G S S K F R G V T L H K C G R W E A R M G Q F L G K K Y V Y L G L F D T E E E A A R A Y D R A
 
AT5G67180.1     A I K C N G K D A V T N F D P K V Y E E E E D L S S E T - - - - - - T R N G H N L G L S L G - - - - - - - - - - - - - -
Sb019932_Sorbi1    A L R F N G R E A V T N F E P S S Y N A G D N S L P D T - - E T E A I V D R D A I D L D L R I S Q P N V Q D P K R D Y T
Sb004977_Sorbi1    A I R F N G P D A V T N F D S S S Y D - G D V P L P T A - - I E K D V V D G D I L D L N L R I S Q P N V H D L K S D G T
Sb030095_Sorbi1    A I K C N G K D A V T N F D P S I Y A E E L E P A A S T G G G S G G G D D E H N L D L S L G S S A G N - - - - - K R G S
 
AT5G67180.1     - - - - - - - - - - - E S S S E E F R L K S D I - - - - - - - A S I R S R I - - - - - - - - - - - - - - - - - - - - - -
Sb019932_Sorbi1    L T S L Q P T C D S P E S S N T - - - - - - - - - - M A S Q P M S S S S P W - - - - - - - - - - - P G Y Q Q N P A V S -
Sb004977_Sorbi1    L T G F G L G C N S P E A S S S - - - - - - - - - - I V S Q P I S P Q - - W - - - - - - - - - - - P V H P H S T P M Q -
Sb030095_Sorbi1    L D G G G G G - - D D E T S D Q R V P M A F D I D W Q T A A P R S T K A K L D A S S K Q P Q M L P P P L P P P P A L Q V
 
AT5G67180.1     - - - - - - - - - - R D E E R L L G S D - - - - - - - - L S L A M - - - - - - - - - - - M T T T V R S E K Q Q - - - - -
Sb019932_Sorbi1    - - - - - - - - - - S H H Q H L Y S S A - - - - - - - - - - - - - - - - - - - C H G S F P N H Q V Q E R P M E - - - R R
Sb004977_Sorbi1    - - - - - - - - - - L Q H P H L Y A S P - - - - - - - - - - - - - - - - - - - C P G F F V N - - L R E A P M E E E K R A
Sb030095_Sorbi1    A H H L P L P F S P R H P Q R Q F L S N G D P G T A G G L S L A I G G A G G G G G G G H W T P Q L Q H Q Q Q H H Q Q R -
 
AT5G67180.1     - - - - - - - - - - - - - - S D G G G N R - - - - - - - - - - - - - V V G M A A S S G F S P Q - - - - - - - - - - - - -
Sb019932_Sorbi1    P E L G A Q P - F P T W A W Q T Q G S - - - - - - P H V P - - - - - L H H S A A S S G F S T A A - - - G A N G G M P L P
Sb004977_Sorbi1    E R A G P E P A F P S W A W Q T Q G S P A - - - - P F L P - - - - - A T A T A A S S G F S T A A T T T G V D A A T A A R
Sb030095_Sorbi1    - - - - - - - - L H G G V W A N G G G T S W P P P P H P P P P T T A A T A A A A S S R F P P Y V V T - - - - - - - - - -
 
AT5G67180.1     - - - P S - - - - P Y R I P R T F H - - F S R P - - - - - - - -
Sb019932_Sorbi1    S H P P A - - - - P - - - - - - - - - - - - F P T T N P F F F P
Sb004977_Sorbi1    S V P P S L S G G P R Q L F S G Y Q L Q L R F P P T A - - - - -
Sb030095_Sorbi1    T Q G P A - - - - G W V Q K N G F H - S L A R P T - - - - - - -
 
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