fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G67180.1 TRNGHNLGLSLGESSS at 264/352 in AT5G67180.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm011901 NAPDHNLDLSLGNSTS in 183/368 AT4G36920.1 1st_not 0.480132450 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G67180.1     MWNLNDSPDHHEESDSRGNPVGHVSNGMSQSATWLPFVLPVTRNFFPAQSMEPGVRWSGF
gm011901_Glyma0 ------------------------------------------------------------
                                                                            

AT5G67180.1     NSVGKSDPSGSGRPEEPEISPPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQV
gm011901_Glyma0 ----------------------MKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQV
                                      :*************************************

AT5G67180.1     YLGGFDTAHAAARAYDRAAIKFRGVDADINFDIEDYLDDLKQMGNLTKEEFMHVLRRQST
gm011901_Glyma0 YLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEDDLKQMSNLTKEEFVHVLRRQST
                *************************:*****:**** ******.*******:********

AT5G67180.1     GFPRGSSKYRGVTLHKCGRWESRLGQFLNKKYVYLGLFDTEIEAARAYDKAAIKCNGKDA
gm011901_Glyma0 GFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEA
                *********************:*:****.*****************************:*

AT5G67180.1     VTNFDPKVYEEEEDLSSETTRNG--HNLGLSLGESSS-----------------------
gm011901_Glyma0 VTNFDPSIYDNE--LNSESTGNAPDHNLDLSLGNSTSNPGNDQALGNQAPNAVTHDQHMP
                ******.:*::*  *.**:* *.  ***.****:*:*                       

AT5G67180.1     --EEFR---LKSDIASI------RSRIRD-------------------------------
gm011901_Glyma0 SESNWRNGGIKPKLVNILPKPCYRSNNKDTHGRDVHGESETLRMLSQTHLHSPAFNEMQQ
                  .::*   :*..:..*      **. :*                               

AT5G67180.1     ----------EERLL----------------------GSDLSLAMMTTTVRSEKQQSDGG
gm011901_Glyma0 RYGPYRSPGGESQMLQNFAHIHPPNFHFPRSSIGGRIGSDLSLSV------ADQQQWQTG
                          *.::*                      ******::      :::** : *

AT5G67180.1     GNRVVGM-AASSGFSPQPSP----YRIPRTFH-FSRP-
gm011901_Glyma0 PSRYLATAAASSSFQQEIRPSSQGWLQKNGLHSLMRPS
                 .* :.  ****.*. :  *    :   . :* : **
BoxShade v3.31 C (beta, 970507) Output
AT5G67180.1     M W N L N D S P D H H E E S D S R G N P V G H V S N G M S Q S A T W L P F V L P V T R N F F P A Q S M E P G V R W S G F
gm011901_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G67180.1     N S V G K S D P S G S G R P E E P E I S P P I K K S R R G P R S R S S Q Y R G V T F Y R R T G R W E S H I W D C G K Q V
gm011901_Glyma0    - - - - - - - - - - - - - - - - - - - - - - M K K S R R G P R S R S S Q Y R G V T F Y R R T G R W E S H I W D C G K Q V
 
AT5G67180.1     Y L G G F D T A H A A A R A Y D R A A I K F R G V D A D I N F D I E D Y L D D L K Q M G N L T K E E F M H V L R R Q S T
gm011901_Glyma0    Y L G G F D T A H A A A R A Y D R A A I K F R G V E A D I N F N I E D Y E D D L K Q M S N L T K E E F V H V L R R Q S T
 
AT5G67180.1     G F P R G S S K Y R G V T L H K C G R W E S R L G Q F L N K K Y V Y L G L F D T E I E A A R A Y D K A A I K C N G K D A
gm011901_Glyma0    G F P R G S S K Y R G V T L H K C G R W E A R M G Q F L G K K Y V Y L G L F D T E I E A A R A Y D K A A I K C N G K E A
 
AT5G67180.1     V T N F D P K V Y E E E E D L S S E T T R N G - - H N L G L S L G E S S S - - - - - - - - - - - - - - - - - - - - - - -
gm011901_Glyma0    V T N F D P S I Y D N E - - L N S E S T G N A P D H N L D L S L G N S T S N P G N D Q A L G N Q A P N A V T H D Q H M P
 
AT5G67180.1     - - E E F R - - - L K S D I A S I - - - - - - R S R I R D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm011901_Glyma0    S E S N W R N G G I K P K L V N I L P K P C Y R S N N K D T H G R D V H G E S E T L R M L S Q T H L H S P A F N E M Q Q
 
AT5G67180.1     - - - - - - - - - - E E R L L - - - - - - - - - - - - - - - - - - - - - - G S D L S L A M M T T T V R S E K Q Q S D G G
gm011901_Glyma0    R Y G P Y R S P G G E S Q M L Q N F A H I H P P N F H F P R S S I G G R I G S D L S L S V - - - - - - A D Q Q Q W Q T G
 
AT5G67180.1     G N R V V G M - A A S S G F S P Q P S P - - - - Y R I P R T F H - F S R P -
gm011901_Glyma0    P S R Y L A T A A A S S S F Q Q E I R P S S Q G W L Q K N G L H S L M R P S
 
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