fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G67190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm011914 not found in 150aa AT5G67190.1 1st_1st 0.481366459 Ia
Pt001651 not found in 187aa AT5G67190.1 1st_1st 0.518633540 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G67190.1     MEGGGVADVAVPGTRKR--------DRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYST
gm011914_Glyma0 MEG--EGGSA---TRKRGKDGETETTTRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYST
pt001651_POPTR_ MESGVDKEMA---TRKRGGMG---SERQYKGIRMRKWGKWVAEIREPNKRSRIWLGSYST
                **.      *   ****           ************************:*******

AT5G67190.1     PEAAARAYDTAVFYLRGPTARLNFPELLPGEKF------SDEDMSAATIRKKATEVGAQV
gm011914_Glyma0 PVAAARAYDTAVFYLRGPSARLNFPELLAAE----GPAASDAVMSAASIRKKATEVGARV
pt001651_POPTR_ PVAAARAYDTAVFYLRGPSARLNFPEFLAGENFSCGGSYGD--MSAASIRKRATEVGARV
                * ****************:*******:*..*        .*  ****:***:******:*

AT5G67190.1     DALGTAVQNNRHRVFGQNRDSDVDNKNFHRNYQNGEREEEEEDEDDKRLRSGG-------
gm011914_Glyma0 DAL-------------------------HR--------------QDPHAPPAG-------
pt001651_POPTR_ DAFETALNHHHHR---------------HH--------------DDRQRNSSNSTSSNDN
                **:                         *:              :* :  ...       

AT5G67190.1     --------RLLDR-VDLNKLPDPESSD-EEWESKH---------
gm011914_Glyma0 --------EFADR-VDLNKIPEPENSDCDYW------GGD----
pt001651_POPTR_ NETVVDSRELKSRPVDLNKVPDPEDSDGDEWERSLATGGNPMGC
                        .: .* *****:*:**.** : *
BoxShade v3.31 C (beta, 970507) Output
AT5G67190.1     M E G G G V A D V A V P G T R K R - - - - - - - - D R P Y K G I R M R K W G K W V A E I R E P N K R S R L W L G S Y S T
gm011914_Glyma0    M E G - - E G G S A - - - T R K R G K D G E T E T T T R Y K G I R M R K W G K W V A E I R E P N K R S R I W L G S Y S T
pt001651_POPTR_    M E S G V D K E M A - - - T R K R G G M G - - - S E R Q Y K G I R M R K W G K W V A E I R E P N K R S R I W L G S Y S T
 
AT5G67190.1     P E A A A R A Y D T A V F Y L R G P T A R L N F P E L L P G E K F - - - - - - S D E D M S A A T I R K K A T E V G A Q V
gm011914_Glyma0    P V A A A R A Y D T A V F Y L R G P S A R L N F P E L L A A E - - - - G P A A S D A V M S A A S I R K K A T E V G A R V
pt001651_POPTR_    P V A A A R A Y D T A V F Y L R G P S A R L N F P E F L A G E N F S C G G S Y G D - - M S A A S I R K R A T E V G A R V
 
AT5G67190.1     D A L G T A V Q N N R H R V F G Q N R D S D V D N K N F H R N Y Q N G E R E E E E E D E D D K R L R S G G - - - - - - -
gm011914_Glyma0    D A L - - - - - - - - - - - - - - - - - - - - - - - - - H R - - - - - - - - - - - - - - Q D P H A P P A G - - - - - - -
pt001651_POPTR_    D A F E T A L N H H H H R - - - - - - - - - - - - - - - H H - - - - - - - - - - - - - - D D R Q R N S S N S T S S N D N
 
AT5G67190.1     - - - - - - - - R L L D R - V D L N K L P D P E S S D - E E W E S K H - - - - - - - - -
gm011914_Glyma0    - - - - - - - - E F A D R - V D L N K I P E P E N S D C D Y W - - - - - - G G D - - - -
pt001651_POPTR_    N E T V V D S R E L K S R P V D L N K V P D P E D S D G D E W E R S L A T G G N P M G C
 
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