fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G67190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016489 not found in 155aa AT1G46768.1 not_not 0.484472049 III
Pt038369 not found in 158aa AT1G46768.1 not_not 0.478260869 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G67190.1     MEGG---------GVADVAVPGTRK------RDRPYKGIRMRKWGKWVAEIREPNKRSRL
pt038369_POPTR_ MEGECYTSPSASSSTPTISSIGKRKHGRQQNQEKPYRGIRMRKWGKWVAEIREPNKRSRI
pt016489_POPTR_ MEGGCCTSSTSTPSSTSTATTEKRKHSRQQNQEKPYRGIRMRKWGKWVAEIREPNKRSRI
                ***          . .  :   .**      :::**:**********************:

AT5G67190.1     WLGSYSTPEAAARAYDTAVFYLRGPTARLNFPELLPGEKFSDE--DMSAATIRKKATEVG
pt038369_POPTR_ WLGSYSTPIAAARAYDTAVFYLRGPSVRLNFPDLIHQE---DELCDVSAASIRKKATEVG
pt016489_POPTR_ WLGSYSTPIAAARAYDTAVFYLRGPSARLNFPDLIYQE---DELRDVSAASIRKKATEVG
                ******** ****************:.*****:*:  *   **  *:***:*********

AT5G67190.1     AQVDALGTAVQNNRHRVFGQNRDSDVDNKNFHRNYQNGEREEEEEDEDDKRLRSGGRLL-
pt038369_POPTR_ AKVDALQTALHA-----------SPGDNSP------------------------ANRLLL
pt016489_POPTR_ AKVDALQTAVHA-----------SPEDNS---------------------------RVLL
                *:**** **::            *  **.                           *:* 

AT5G67190.1     -DRVDLNKLPDPESSDEEWESKH
pt038369_POPTR_ SEKPDLNEY--PENCDEE-----
pt016489_POPTR_ SEKPDLNKF--PENSDEE-----
                 :: ***:   **..***
BoxShade v3.31 C (beta, 970507) Output
AT5G67190.1     M E G G - - - - - - - - - G V A D V A V P G T R K - - - - - - R D R P Y K G I R M R K W G K W V A E I R E P N K R S R L
pt038369_POPTR_    M E G E C Y T S P S A S S S T P T I S S I G K R K H G R Q Q N Q E K P Y R G I R M R K W G K W V A E I R E P N K R S R I
pt016489_POPTR_    M E G G C C T S S T S T P S S T S T A T T E K R K H S R Q Q N Q E K P Y R G I R M R K W G K W V A E I R E P N K R S R I
 
AT5G67190.1     W L G S Y S T P E A A A R A Y D T A V F Y L R G P T A R L N F P E L L P G E K F S D E - - D M S A A T I R K K A T E V G
pt038369_POPTR_    W L G S Y S T P I A A A R A Y D T A V F Y L R G P S V R L N F P D L I H Q E - - - D E L C D V S A A S I R K K A T E V G
pt016489_POPTR_    W L G S Y S T P I A A A R A Y D T A V F Y L R G P S A R L N F P D L I Y Q E - - - D E L R D V S A A S I R K K A T E V G
 
AT5G67190.1     A Q V D A L G T A V Q N N R H R V F G Q N R D S D V D N K N F H R N Y Q N G E R E E E E E D E D D K R L R S G G R L L -
pt038369_POPTR_    A K V D A L Q T A L H A - - - - - - - - - - - S P G D N S P - - - - - - - - - - - - - - - - - - - - - - - - A N R L L L
pt016489_POPTR_    A K V D A L Q T A V H A - - - - - - - - - - - S P E D N S - - - - - - - - - - - - - - - - - - - - - - - - - - - R V L L
 
AT5G67190.1     - D R V D L N K L P D P E S S D E E W E S K H
pt038369_POPTR_    S E K P D L N E Y - - P E N C D E E - - - - -
pt016489_POPTR_    S E K P D L N K F - - P E N S D E E - - - - -
 
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