fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G67190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001651 not found in 187aa AT5G67190.1 1st_1st 0.518633540 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G67190.1     MEGGGVADVAVPGTRKR-----DRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEA
pt001651_POPTR_ MESGVDKEMA---TRKRGGMGSERQYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVA
                **.*   ::*   ****     :* ************************:******** *

AT5G67190.1     AARAYDTAVFYLRGPTARLNFPELLPGEKF----SDEDMSAATIRKKATEVGAQVDALGT
pt001651_POPTR_ AARAYDTAVFYLRGPSARLNFPEFLAGENFSCGGSYGDMSAASIRKRATEVGARVDAFET
                ***************:*******:*.**:*    *  *****:***:******:***: *

AT5G67190.1     AVQNNRHRVFGQNRDSDVDNKNFHRNYQNGEREEEEEDE--DDKRLRSGGRLLDRVDLNK
pt001651_POPTR_ ALNHHHHR----------HHDDRQRNSSNSTSSNDNNETVVDSRELKS-----RPVDLNK
                *:::::**          .:.: :** .*.  .:::::   *.:.*:*       *****

AT5G67190.1     LPDPESSD-EEWESKH---------
pt001651_POPTR_ VPDPEDSDGDEWERSLATGGNPMGC
                :****.** :*** .
BoxShade v3.31 C (beta, 970507) Output
AT5G67190.1     M E G G G V A D V A V P G T R K R - - - - - D R P Y K G I R M R K W G K W V A E I R E P N K R S R L W L G S Y S T P E A
pt001651_POPTR_    M E S G V D K E M A - - - T R K R G G M G S E R Q Y K G I R M R K W G K W V A E I R E P N K R S R I W L G S Y S T P V A
 
AT5G67190.1     A A R A Y D T A V F Y L R G P T A R L N F P E L L P G E K F - - - - S D E D M S A A T I R K K A T E V G A Q V D A L G T
pt001651_POPTR_    A A R A Y D T A V F Y L R G P S A R L N F P E F L A G E N F S C G G S Y G D M S A A S I R K R A T E V G A R V D A F E T
 
AT5G67190.1     A V Q N N R H R V F G Q N R D S D V D N K N F H R N Y Q N G E R E E E E E D E - - D D K R L R S G G R L L D R V D L N K
pt001651_POPTR_    A L N H H H H R - - - - - - - - - - H H D D R Q R N S S N S T S S N D N N E T V V D S R E L K S - - - - - R P V D L N K
 
AT5G67190.1     L P D P E S S D - E E W E S K H - - - - - - - - -
pt001651_POPTR_    V P D P E D S D G D E W E R S L A T G G N P M G C
 
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