fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G67190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm014043 not found in 159aa AT5G67190.1 not_1st 0.468944099 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G67190.1     MEGGGVADVAVPGT-------------RKRDRPYKGIRMRKWGKWVAEIREPNKRSRLWL
gm014043_Glyma0 MEEAGLGDCCSSNTTITRKSEKRKQQHQQQEKPYRGIRMRKWGKWVAEIREPNKRSRIWL
                ** .*:.* . ..*             :::::**:**********************:**

AT5G67190.1     GSYSTPEAAARAYDTAVFYLRGPTARLNFPELLPGEKFSDED--------MSAATIRKKA
gm014043_Glyma0 GSYATPVAAARAYDTAVFHLRGPSARLNFPELLS----QDDDVSTQQQGKMSADSIRKKA
                ***:** ***********:****:*********.    .*:*        *** :*****

AT5G67190.1     TEVGAQVDALGTAVQ--NNRHRVFGQNRDSDVDNKNFHRNYQNGEREEEEEDEDDKRLRS
gm014043_Glyma0 TQVGARVDALQTALQQSSSTHSI-----------SSSHVSYE------------------
                *:***:**** **:*  .. * :           .. * .*:                  

AT5G67190.1     GGRLLDRVDLNKLPDPESSDEEWESKH
gm014043_Glyma0 ------KPDLNEYPKPED---------
                      : ***: *.**.
BoxShade v3.31 C (beta, 970507) Output
AT5G67190.1     M E G G G V A D V A V P G T - - - - - - - - - - - - - R K R D R P Y K G I R M R K W G K W V A E I R E P N K R S R L W L
gm014043_Glyma0    M E E A G L G D C C S S N T T I T R K S E K R K Q Q H Q Q Q E K P Y R G I R M R K W G K W V A E I R E P N K R S R I W L
 
AT5G67190.1     G S Y S T P E A A A R A Y D T A V F Y L R G P T A R L N F P E L L P G E K F S D E D - - - - - - - - M S A A T I R K K A
gm014043_Glyma0    G S Y A T P V A A A R A Y D T A V F H L R G P S A R L N F P E L L S - - - - Q D D D V S T Q Q Q G K M S A D S I R K K A
 
AT5G67190.1     T E V G A Q V D A L G T A V Q - - N N R H R V F G Q N R D S D V D N K N F H R N Y Q N G E R E E E E E D E D D K R L R S
gm014043_Glyma0    T Q V G A R V D A L Q T A L Q Q S S S T H S I - - - - - - - - - - - S S S H V S Y E - - - - - - - - - - - - - - - - - -
 
AT5G67190.1     G G R L L D R V D L N K L P D P E S S D E E W E S K H
gm014043_Glyma0    - - - - - - K P D L N E Y P K P E D - - - - - - - - -
 
0