fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G67190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm011914 not found in 150aa AT5G67190.1 1st_1st 0.481366459 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G67190.1     MEG-GGVADVAVPGTRKRDRP--------YKGIRMRKWGKWVAEIREPNKRSRLWLGSYS
gm011914_Glyma0 MEGEGGSA------TRKRGKDGETETTTRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYS
                *** ** *      ****.:         ************************:******

AT5G67190.1     TPEAAARAYDTAVFYLRGPTARLNFPELLPGE--KFSDEDMSAATIRKKATEVGAQVDAL
gm011914_Glyma0 TPVAAARAYDTAVFYLRGPSARLNFPELLAAEGPAASDAVMSAASIRKKATEVGARVDAL
                ** ****************:*********..*    **  ****:**********:****

AT5G67190.1     GTAVQNNRHRVFGQNRDSDVDNKNFHRNYQNGEREEEEEDEDDKRLRSGGRLLDRVDLNK
gm011914_Glyma0 -------------------------HRQ--------------DPHAPPAGEFADRVDLNK
                                         **:              * :  ..*.: *******

AT5G67190.1     LPDPESSD-EEWESKH
gm011914_Glyma0 IPEPENSDCDYWGGD-
                :*:**.** : * ..
BoxShade v3.31 C (beta, 970507) Output
AT5G67190.1     M E G - G G V A D V A V P G T R K R D R P - - - - - - - - Y K G I R M R K W G K W V A E I R E P N K R S R L W L G S Y S
gm011914_Glyma0    M E G E G G S A - - - - - - T R K R G K D G E T E T T T R Y K G I R M R K W G K W V A E I R E P N K R S R I W L G S Y S
 
AT5G67190.1     T P E A A A R A Y D T A V F Y L R G P T A R L N F P E L L P G E - - K F S D E D M S A A T I R K K A T E V G A Q V D A L
gm011914_Glyma0    T P V A A A R A Y D T A V F Y L R G P S A R L N F P E L L A A E G P A A S D A V M S A A S I R K K A T E V G A R V D A L
 
AT5G67190.1     G T A V Q N N R H R V F G Q N R D S D V D N K N F H R N Y Q N G E R E E E E E D E D D K R L R S G G R L L D R V D L N K
gm011914_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - H R Q - - - - - - - - - - - - - - D P H A P P A G E F A D R V D L N K
 
AT5G67190.1     L P D P E S S D - E E W E S K H
gm011914_Glyma0    I P E P E N S D C D Y W G G D -
 
0