fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G67300.1 DDPPTSLSLSLPGADV at 192/305 in AT5G67300.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037616 NDPPTSLSLSLPGADS in 213/330 AT4G37260.1 1st_not 0.547244094 II
Pt016180 VDPPTSLSLSLPGSIT in 195/311 AT5G67300.1 not_1st 0.492125984 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G67300.1     MA------DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSP
pt016180_POPTR_ MASSRKDVDRIKGPWSPEEDEALQRLVQTYGPRNWSLISKSIPGRSGKSCRLRWCNQLSP
pt037616_POPTR_ MAITRKEMDRIKGPWSPEEDEALQKLVQKHGARNWSLISKSIPGRSGKSCRLRWCNQLSP
                **      ************* *::** .:*.***::***********************

AT5G67300.1     QVEHRPFSAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGY----
pt016180_POPTR_ EVEHRPFSAEEDDTIIRAHARIGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSMFDDL
pt037616_POPTR_ QVEHRPFTPDEDDTIIRAHARFGNKWATIARLLYGRTDNAIKNHWNSTLKRKCSSMAEDG
                :******:.:**:** ****::*********** ******:************..     

AT5G67300.1     ---DHRGYDGSED---HRPVKRSVSAGSP-PVVTGLYMSPGSPTGSDVSDSSTIPILPSV
pt016180_POPTR_ N-----------DDAQQQPLKRSASLGAG----SGLHLNPSSPSGSDLSDSS-IPGVNSS
pt037616_POPTR_ NFCNREGYDGNLDGDNTQPLKRSVSAGSGVPVSTGLYMSPGSPSGSDVSDSS-LPGLSSS
                            *    :*:***.* *:     :**::.*.**:***:**** :* : * 

AT5G67300.1     ---ELFKPVPRPGAVVLP-LPIETSSSSDDPPTSLSLSLPGA-------DVSEESNRSHE
pt016180_POPTR_ ---PVFRPPVKTASLVPPSLSIDVSSPTVDPPTSLSLSLPGSITCQAPGSGSSSGSHVVN
pt037616_POPTR_ YNYNIYRPVARTGAVMPPVETTSSSDNNNDPPTSLSLSLPGA-------DSSEVSNQVGE
                    :::*  :..::: *  . . *. . ************:       . *. ..:  :

AT5G67300.1     S---------TNINNTTSSRH------NHNNTVSF----MPFSGGFRGAIEEMGKSFPGN
pt016180_POPTR_ P---------TPMVQTPAAPPQAAVAVQQQEQVSFLQQKNP--GSRLENQ--------FF
pt037616_POPTR_ PSQLPKSNTVTPLLTGRNAPA---------------QEVSPAVGGLSGSV--------GF
                .         * :     :                     *  *.               

AT5G67300.1     GGEFMAVVQEMIKAEVRSYMTEMQRNNGGGF-VGGFIDNGM--------IPMSQIGVGRI
pt016180_POPTR_ SAEFLAVMQEMIRKEVRNYM--------SGIEQNGLC---LGTEAIRN-AVVKRIGISRI
pt037616_POPTR_ NTEFMSVMQEMIRKEVRNYMME-----HSGV-GGGMCYQGMSGEGFRNVAVNNRVGLVKL
                . **::*:****: ***.**        .*.  .*:    :           .::*: ::

AT5G67300.1     E------
pt016180_POPTR_ E------
pt037616_POPTR_ SSEKWTG
                .
BoxShade v3.31 C (beta, 970507) Output
AT5G67300.1     M A - - - - - - D R I K G P W S P E E D E Q L R R L V V K Y G P R N W T V I S K S I P G R S G K S C R L R W C N Q L S P
pt016180_POPTR_    M A S S R K D V D R I K G P W S P E E D E A L Q R L V Q T Y G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S P
pt037616_POPTR_    M A I T R K E M D R I K G P W S P E E D E A L Q K L V Q K H G A R N W S L I S K S I P G R S G K S C R L R W C N Q L S P
 
AT5G67300.1     Q V E H R P F S A E E D E T I A R A H A Q F G N K W A T I A R L L N G R T D N A V K N H W N S T L K R K C G G Y - - - -
pt016180_POPTR_    E V E H R P F S A E E D D T I I R A H A R I G N K W A T I A R L L N G R T D N A I K N H W N S T L K R K C S S M F D D L
pt037616_POPTR_    Q V E H R P F T P D E D D T I I R A H A R F G N K W A T I A R L L Y G R T D N A I K N H W N S T L K R K C S S M A E D G
 
AT5G67300.1     - - - D H R G Y D G S E D - - - H R P V K R S V S A G S P - P V V T G L Y M S P G S P T G S D V S D S S T I P I L P S V
pt016180_POPTR_    N - - - - - - - - - - - D D A Q Q Q P L K R S A S L G A G - - - - S G L H L N P S S P S G S D L S D S S - I P G V N S S
pt037616_POPTR_    N F C N R E G Y D G N L D G D N T Q P L K R S V S A G S G V P V S T G L Y M S P G S P S G S D V S D S S - L P G L S S S
 
AT5G67300.1     - - - E L F K P V P R P G A V V L P - L P I E T S S S S D D P P T S L S L S L P G A - - - - - - - D V S E E S N R S H E
pt016180_POPTR_    - - - P V F R P P V K T A S L V P P S L S I D V S S P T V D P P T S L S L S L P G S I T C Q A P G S G S S S G S H V V N
pt037616_POPTR_    Y N Y N I Y R P V A R T G A V M P P V E T T S S S D N N N D P P T S L S L S L P G A - - - - - - - D S S E V S N Q V G E
 
AT5G67300.1     S - - - - - - - - - T N I N N T T S S R H - - - - - - N H N N T V S F - - - - M P F S G G F R G A I E E M G K S F P G N
pt016180_POPTR_    P - - - - - - - - - T P M V Q T P A A P P Q A A V A V Q Q Q E Q V S F L Q Q K N P - - G S R L E N Q - - - - - - - - F F
pt037616_POPTR_    P S Q L P K S N T V T P L L T G R N A P A - - - - - - - - - - - - - - - Q E V S P A V G G L S G S V - - - - - - - - G F
 
AT5G67300.1     G G E F M A V V Q E M I K A E V R S Y M T E M Q R N N G G G F - V G G F I D N G M - - - - - - - - I P M S Q I G V G R I
pt016180_POPTR_    S A E F L A V M Q E M I R K E V R N Y M - - - - - - - - S G I E Q N G L C - - - L G T E A I R N - A V V K R I G I S R I
pt037616_POPTR_    N T E F M S V M Q E M I R K E V R N Y M M E - - - - - H S G V - G G G M C Y Q G M S G E G F R N V A V N N R V G L V K L
 
AT5G67300.1     E - - - - - -
pt016180_POPTR_    E - - - - - -
pt037616_POPTR_    S S E K W T G
 
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