fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G67300.1 DDPPTSLSLSLPGADV at 192/305 in AT5G67300.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037616 NDPPTSLSLSLPGADS in 213/330 AT4G37260.1 1st_not 0.547244094 II
Pt000862 not found in 351aa AT4G37260.1 not_not 0.503937007 III
Pt016180 VDPPTSLSLSLPGSIT in 195/311 AT5G67300.1 not_1st 0.492125984 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G67300.1     MA------DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSP
pt016180_POPTR_ MASSRKDVDRIKGPWSPEEDEALQRLVQTYGPRNWSLISKSIPGRSGKSCRLRWCNQLSP
pt000862_POPTR_ MATTRKEMDRIKGPWSPEEDEALKKLVQRHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP
pt037616_POPTR_ MAITRKEMDRIKGPWSPEEDEALQKLVQKHGARNWSLISKSIPGRSGKSCRLRWCNQLSP
                **      ************* *::**  :*.***::***********************

AT5G67300.1     QVEHRPFSAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGY----
pt016180_POPTR_ EVEHRPFSAEEDDTIIRAHARIGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSMFDDL
pt000862_POPTR_ QVEHRAFTPEEDDRIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSMADDG
pt037616_POPTR_ QVEHRPFTPDEDDTIIRAHARFGNKWATIARLLYGRTDNAIKNHWNSTLKRKCSSMAEDG
                :****.*:.:**: * ****::*********** ******:************..     

AT5G67300.1     ---DHRGYDGS---EDHRPVKRSVSAGSP-PVVTGLYMSPGSPTGSDVSDSSTIPILPSV
pt016180_POPTR_ N-----------DDAQQQPLKRSASLGAG----SGLHLNPSSPSGSDLSDSS-IPGVNSS
pt000862_POPTR_ NLSNLEGYDGNLDVDDTQPSKRSVSAGSGVPLSTGLYMSPGSPSGSDVSDSS-PPGLSSA
pt037616_POPTR_ NFCNREGYDGNLDGDNTQPLKRSVSAGSGVPVSTGLYMSPGSPSGSDVSDSS-LPGLSSS
                               : :* ***.* *:     :**::.*.**:***:****  * : * 

AT5G67300.1     ---ELFKPVPRPGAVVLPLPIETSSSS----DDPPTSLSLSLPGAD-------VSEESNR
pt016180_POPTR_ ---PVFRPPVKTAS-LVP-PSLSIDVSSPT-VDPPTSLSLSLPGSITCQAPGSGSSSGSH
pt000862_POPTR_ HNHNIYRPVARTGG-VLP-PVETASSSDNNDDDPPTLLSLSLPGAD------PATKLPNR
pt037616_POPTR_ YNYNIYRPVARTGA-VMP-PVETTSSSDNN-NDPPTSLSLSLPGAD-------SSEVSNQ
                    :::*  :... ::* *  : . *     **** *******:         :.  .:

AT5G67300.1     SHESTNINNTTS------------------SRHNHNNTV-SFM-----PFS------GGF
pt016180_POPTR_ VVNPTPMVQTPAAPPQAAVAVQQQEQV-------------SFLQQKN-PGSRLEN-----
pt000862_POPTR_ VVEPTH--ERVAGSTQERVAGSTKERVAGSTQEPKPNTVTSFLVAAD-PAQVTTPVVAGQ
pt037616_POPTR_ VGEP--------------------------SQLPKSNTVTPLLTGRNAPAQEVSPAVGGL
                  :.                                    .::     * .         

AT5G67300.1     RGAIEEMGKSFPGNGGEFMAVVQEMIKAEVRSYMTEMQRNN-GGGFV-----GGFIDNGM
pt016180_POPTR_ -----------QFFSAEFLAVMQEMIRKEVRNYMSGIEQN----GLC---LGTEAIRNAV
pt000862_POPTR_ TGRP---GCGFVGLSRELMTVMQEMIRREVRNYM--MEQS--GGGMCYQGMSGEGFRNVA
pt037616_POPTR_ SGS--------VGFNTEFMSVMQEMIRKEVRNYM--MEHSGVGGGMCYQGMSGEGFRNVA
                              . *:::*:****: ***.**  :::.    *:         : *  

AT5G67300.1     IPMSQIGVGRIE------
pt016180_POPTR_ V--KRIGISRIE------
pt000862_POPTR_ V--NRVGVGKIE------
pt037616_POPTR_ VN-NRVGLVKLSSEKWTG
                :  .::*: ::.
BoxShade v3.31 C (beta, 970507) Output
AT5G67300.1     M A - - - - - - D R I K G P W S P E E D E Q L R R L V V K Y G P R N W T V I S K S I P G R S G K S C R L R W C N Q L S P
pt016180_POPTR_    M A S S R K D V D R I K G P W S P E E D E A L Q R L V Q T Y G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S P
pt000862_POPTR_    M A T T R K E M D R I K G P W S P E E D E A L K K L V Q R H G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S P
pt037616_POPTR_    M A I T R K E M D R I K G P W S P E E D E A L Q K L V Q K H G A R N W S L I S K S I P G R S G K S C R L R W C N Q L S P
 
AT5G67300.1     Q V E H R P F S A E E D E T I A R A H A Q F G N K W A T I A R L L N G R T D N A V K N H W N S T L K R K C G G Y - - - -
pt016180_POPTR_    E V E H R P F S A E E D D T I I R A H A R I G N K W A T I A R L L N G R T D N A I K N H W N S T L K R K C S S M F D D L
pt000862_POPTR_    Q V E H R A F T P E E D D R I I R A H A R F G N K W A T I A R L L N G R T D N A I K N H W N S T L K R K C S S M A D D G
pt037616_POPTR_    Q V E H R P F T P D E D D T I I R A H A R F G N K W A T I A R L L Y G R T D N A I K N H W N S T L K R K C S S M A E D G
 
AT5G67300.1     - - - D H R G Y D G S - - - E D H R P V K R S V S A G S P - P V V T G L Y M S P G S P T G S D V S D S S T I P I L P S V
pt016180_POPTR_    N - - - - - - - - - - - D D A Q Q Q P L K R S A S L G A G - - - - S G L H L N P S S P S G S D L S D S S - I P G V N S S
pt000862_POPTR_    N L S N L E G Y D G N L D V D D T Q P S K R S V S A G S G V P L S T G L Y M S P G S P S G S D V S D S S - P P G L S S A
pt037616_POPTR_    N F C N R E G Y D G N L D G D N T Q P L K R S V S A G S G V P V S T G L Y M S P G S P S G S D V S D S S - L P G L S S S
 
AT5G67300.1     - - - E L F K P V P R P G A V V L P L P I E T S S S S - - - - D D P P T S L S L S L P G A D - - - - - - - V S E E S N R
pt016180_POPTR_    - - - P V F R P P V K T A S - L V P - P S L S I D V S S P T - V D P P T S L S L S L P G S I T C Q A P G S G S S S G S H
pt000862_POPTR_    H N H N I Y R P V A R T G G - V L P - P V E T A S S S D N N D D D P P T L L S L S L P G A D - - - - - - P A T K L P N R
pt037616_POPTR_    Y N Y N I Y R P V A R T G A - V M P - P V E T T S S S D N N - N D P P T S L S L S L P G A D - - - - - - - S S E V S N Q
 
AT5G67300.1     S H E S T N I N N T T S - - - - - - - - - - - - - - - - - - S R H N H N N T V - S F M - - - - - P F S - - - - - - G G F
pt016180_POPTR_    V V N P T P M V Q T P A A P P Q A A V A V Q Q Q E Q V - - - - - - - - - - - - - S F L Q Q K N - P G S R L E N - - - - -
pt000862_POPTR_    V V E P T H - - E R V A G S T Q E R V A G S T K E R V A G S T Q E P K P N T V T S F L V A A D - P A Q V T T P V V A G Q
pt037616_POPTR_    V G E P - - - - - - - - - - - - - - - - - - - - - - - - - - S Q L P K S N T V T P L L T G R N A P A Q E V S P A V G G L
 
AT5G67300.1     R G A I E E M G K S F P G N G G E F M A V V Q E M I K A E V R S Y M T E M Q R N N - G G G F V - - - - - G G F I D N G M
pt016180_POPTR_    - - - - - - - - - - - Q F F S A E F L A V M Q E M I R K E V R N Y M S G I E Q N - - - - G L C - - - L G T E A I R N A V
pt000862_POPTR_    T G R P - - - G C G F V G L S R E L M T V M Q E M I R R E V R N Y M - - M E Q S - - G G G M C Y Q G M S G E G F R N V A
pt037616_POPTR_    S G S - - - - - - - - V G F N T E F M S V M Q E M I R K E V R N Y M - - M E H S G V G G G M C Y Q G M S G E G F R N V A
 
AT5G67300.1     I P M S Q I G V G R I E - - - - - -
pt016180_POPTR_    V - - K R I G I S R I E - - - - - -
pt000862_POPTR_    V - - N R V G V G K I E - - - - - -
pt037616_POPTR_    V N - N R V G L V K L S S E K W T G
 
0