fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G67300.1 DDPPTSLSLSLPGADV at 192/305 in AT5G67300.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os006758 DDPLTSLSLSLSLPGF in 196/301 AT5G67300.1 not_1st 0.405511811 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G67300.1     -----MADRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQ
Os006758_Os02t0 MGMEAECDRIKGPWSPEEDEALRRLVERHGARNWTAIGRGIPGRSGKSCRLRWCNQLSPQ
                      .************* ***** ::*.****.*.:.********************

AT5G67300.1     VEHRPFSAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGYDHRGY
Os006758_Os02t0 VERRPFTAEEDAAILRAHARLGNRWAAIARLLPGRTDNAVKNHWNSSLKRKLA----TAT
                **:***:**** :* ****::**:**:***** *************:**** .     . 

AT5G67300.1     DGSEDHRPVKRSVSAGSPPVVTGLYMSPGSPTGSDVSDSSTIPILPSV---ELFKPVPRP
Os006758_Os02t0 DGGEIDRPCKR-VSPG-----------PGSPTGSERSELSHGGCGSGSGGGQVFRPVPRP
                **.* .** ** **.*           *******: *: *     ..    ::*:*****

AT5G67300.1     GA--------VVLPLPIETSSS----SDDPPTSLSLSLPGADVSEESNRSHESTNINNTT
Os006758_Os02t0 GGFDAISAADVVRP-PRRRDDNDDDGDDDPLTSLSLSLSLPGFHHDSARSH-FQELPSPS
                *.        ** * * . ...    .*** *******. ... .:* ***   :: ..:

AT5G67300.1     SSRHNHNNTVSFMPFSGGFRGAIEEMGKSFPGNGGEFMAVVQEMIKAEVRSYMTEMQRNN
Os006758_Os02t0 RSPSPPPSPPAASP-------------SAYPFN-ADLVSAMQEMIRTEVRNYMAGVGLRA
                 *     .. :  *             .::* * .::::.:****::***.**: :  . 

AT5G67300.1     GGGFVGGFIDNGMIPMSQIGVGRIE----------
Os006758_Os02t0 GCG--PGAVAESFMPQLVDGVMRAAAERVGVVTRQ
                * *   * : :.::*    ** *
BoxShade v3.31 C (beta, 970507) Output
AT5G67300.1     - - - - - M A D R I K G P W S P E E D E Q L R R L V V K Y G P R N W T V I S K S I P G R S G K S C R L R W C N Q L S P Q
Os006758_Os02t0    M G M E A E C D R I K G P W S P E E D E A L R R L V E R H G A R N W T A I G R G I P G R S G K S C R L R W C N Q L S P Q
 
AT5G67300.1     V E H R P F S A E E D E T I A R A H A Q F G N K W A T I A R L L N G R T D N A V K N H W N S T L K R K C G G Y D H R G Y
Os006758_Os02t0    V E R R P F T A E E D A A I L R A H A R L G N R W A A I A R L L P G R T D N A V K N H W N S S L K R K L A - - - - T A T
 
AT5G67300.1     D G S E D H R P V K R S V S A G S P P V V T G L Y M S P G S P T G S D V S D S S T I P I L P S V - - - E L F K P V P R P
Os006758_Os02t0    D G G E I D R P C K R - V S P G - - - - - - - - - - - P G S P T G S E R S E L S H G G C G S G S G G G Q V F R P V P R P
 
AT5G67300.1     G A - - - - - - - - V V L P L P I E T S S S - - - - S D D P P T S L S L S L P G A D V S E E S N R S H E S T N I N N T T
Os006758_Os02t0    G G F D A I S A A D V V R P - P R R R D D N D D D G D D D P L T S L S L S L S L P G F H H D S A R S H - F Q E L P S P S
 
AT5G67300.1     S S R H N H N N T V S F M P F S G G F R G A I E E M G K S F P G N G G E F M A V V Q E M I K A E V R S Y M T E M Q R N N
Os006758_Os02t0    R S P S P P P S P P A A S P - - - - - - - - - - - - - S A Y P F N - A D L V S A M Q E M I R T E V R N Y M A G V G L R A
 
AT5G67300.1     G G G F V G G F I D N G M I P M S Q I G V G R I E - - - - - - - - - -
Os006758_Os02t0    G C G - - P G A V A E S F M P Q L V D G V M R A A A E R V G V V T R Q
 
0