fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G67300.1 DDPPTSLSLSLPGADV at 192/305 in AT5G67300.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029895 NDPPTSLSLSLPGVGV in 188/297 AT5G67300.1 not_1st 0.517716535 II
Gm011952 AGPATSLSLSLPGVES in 196/295 AT5G67300.1 not_1st 0.486220472 II
Gm047970 CDPATSLSLSLPGFGS in 176/268 AT5G67300.1 not_1st 0.458661417 II
Gm039420 PDPATSLSLSLPGFTV in 186/273 AT5G67300.1 not_1st 0.444881889 II
Gm008871 not found in 265aa AT5G67300.1 not_1st 0.442913385 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G67300.1     ---------MADRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQ
gm029895_Glyma1 ----------MDRIKGPWSPEEDEALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQ
gm047970_Glyma1 ----------MDRVKGPWSPEEDEALRRLVQAHGPRNWSVISKSVPGRSGKSCRLRWCNQ
gm011952_Glyma0 MIAVARK--DMDRIKGPWSPEEDEALQKLVERHGPRNWSLISRSIPGRSGKSCRLRWCNQ
gm008871_Glyma0 --MASAK--DMDRIKGPWSPEEDEALRRLVQTYGPRNWSVISKSIPGRSGKSCRLRWCNQ
gm039420_Glyma1 MVSSSGKSREMDRVKGPWSPEEDEALRALVQAHGPRNWSVISKSIPGRSGKSCRLRWCNQ
                           **:********** *: **  :*****::**:*:***************

AT5G67300.1     LSPQVEHRPFSAEEDETIARAHAQFGNKWATIARLL-NGRTDNAVKNHWNSTLKRKCGGY
gm029895_Glyma1 LSPQVEHRAFTAEEDDTIIRAHARFGNKWATIARLL-HGRTDNAIKNHWNSTLKRKCSST
gm047970_Glyma1 LSPQVAHRPFSPDEDEAIVRAHARFGNKWATIARLLNNGRTDNAVKNHWNSTLKRKKCSA
gm011952_Glyma0 LSPQVEHRAFTPEEDETIIRAHARFGNKWATIARLL-SGRTDNAIKNHWNSTLKRKCASF
gm008871_Glyma0 LSPEVERRPFTAEEDEAILKAHARFGNKWATIARFL-NGRTDNAIKNHWNSTLKRKCSEP
gm039420_Glyma1 LSPQVAHRPFSQEEDEAIIMAHAKFGNKWATIARLL-NGRTDNAVKNHWNSTLKRKS-SA
                ***:* :*.*: :**::*  ***:**********:*  ******:***********    

AT5G67300.1     DHRGYDG-SEDHRPVKRSVSAGSPP-VVTGLY---MSPGSPTGSDVSDSSTIPILPSVEL
gm029895_Glyma1 MI--DD----NTQPLKRSVSAGAAIPVSTGLYMNPPTPGSPSGSDVSESS----LP----
gm047970_Glyma1 VS--DD--VTDRPPLKRSASVGPAH----------LNPGSPSGSDLSDPS----LPAL--
gm011952_Glyma0 MMAGDEAVAVSPRPLKRSFSAGAAV----------PPPGSPSGSDFSESS----APGV--
gm008871_Glyma0 LS--------EPRPLKRSATVS----------------GSQSGSDLSDSG----LPII--
gm039420_Glyma1 VS--DDDVVTHRQPLKRSNSVGPAH----------LNPASPSVSDLSDPG----LPAL--
                             *:*** :..                .* : **.*:..     *    

AT5G67300.1     FKPVPRPGAVVLPLP--------IETSSSSDD-----PPTSLSLSLPGA---DVSEESNR
gm029895_Glyma1 ---VASSSHVFRPVPRTVKVLPPVETTSSSND-----PPTSLSLSLPGVGVVDSSEVSNR
gm047970_Glyma1 --SNPSPSAHYRPNL--------METASSACD-----PATSLSLSLPGFG----------
gm011952_Glyma0 --VSVSPSHVFRPVP----VRPIVETASSQDDADDAGPATSLSLSLPG---VESAEISNR
gm008871_Glyma0 --LARSVSVTVAPSNHL------AETASSSVT--D--PATLLSLSLPGF---DSCDGANN
gm039420_Glyma1 --SNPSPSAHYMPNL--------METASSAPD-----PATSLSLSLPGF-----------
                       .    *           **:**        *.* *******            

AT5G67300.1     SHESTNINNTTSSRHNHNNTVSFMPFSGGFRGAIEEMGKSFPGN----------GGEFMA
gm029895_Glyma1 TTEPIHF--TPPMPHRSNTMP-LLPMMTSVSATVMA-----P---------FNFSAEFRS
gm047970_Glyma1 ----------------SGSNPVCAPRPVSVSPPSPP-----PAEPVEQRGKQMFNAEFLR
gm011952_Glyma0 AT----------------TVP-VMPVNT-VAAPAPV-----PAEV--GLGALNLSGEFMA
gm008871_Glyma0 GPGP-------------NQGPSCGPFQE------------IP---MLGSQKQLFSQEFMK
gm039420_Glyma1 ----------------------TVPQP--VSPPPPPL--PLPAETVEERGKQMFNAEFLR
                                        *                *            . **  

AT5G67300.1     VVQEMIKAEVRSYMTEMQRN----NGG-GFVGGFI------DNGMIPMSQIGVGRIE-
gm029895_Glyma1 VMQEMIRKEVRSYIELHNQNGMCFQA--AVNDGFR-------NASV--KRIGISRVDS
gm047970_Glyma1 VMQEMIRKEVRSYM----------SGM-EQKNGFRIPTEAIGNAVV--KRMGISNIE-
gm011952_Glyma0 VMHEMIRKEVRSYMEQQKNGMMCFQGM-EMMEGFR-------NVSV--KRIGISRVDS
gm008871_Glyma0 VMQEMIRVEVRNYMSVLERNGVC-----MQTDAIR-------NSVL--ERMGIGRVE-
gm039420_Glyma1 VMQEMIKKEVRSYM----------SGMEEQKNGFRMQTEAIGNAVV--KRMGISNIE-
                *::***: ***.*:                  .:        *  :  .::*:..::
BoxShade v3.31 C (beta, 970507) Output
AT5G67300.1     - - - - - - - - - M A D R I K G P W S P E E D E Q L R R L V V K Y G P R N W T V I S K S I P G R S G K S C R L R W C N Q
gm029895_Glyma1    - - - - - - - - - - M D R I K G P W S P E E D E A L Q K L V E K H G P R N W S L I S K S I P G R S G K S C R L R W C N Q
gm047970_Glyma1    - - - - - - - - - - M D R V K G P W S P E E D E A L R R L V Q A H G P R N W S V I S K S V P G R S G K S C R L R W C N Q
gm011952_Glyma0    M I A V A R K - - D M D R I K G P W S P E E D E A L Q K L V E R H G P R N W S L I S R S I P G R S G K S C R L R W C N Q
gm008871_Glyma0    - - M A S A K - - D M D R I K G P W S P E E D E A L R R L V Q T Y G P R N W S V I S K S I P G R S G K S C R L R W C N Q
gm039420_Glyma1    M V S S S G K S R E M D R V K G P W S P E E D E A L R A L V Q A H G P R N W S V I S K S I P G R S G K S C R L R W C N Q
 
AT5G67300.1     L S P Q V E H R P F S A E E D E T I A R A H A Q F G N K W A T I A R L L - N G R T D N A V K N H W N S T L K R K C G G Y
gm029895_Glyma1    L S P Q V E H R A F T A E E D D T I I R A H A R F G N K W A T I A R L L - H G R T D N A I K N H W N S T L K R K C S S T
gm047970_Glyma1    L S P Q V A H R P F S P D E D E A I V R A H A R F G N K W A T I A R L L N N G R T D N A V K N H W N S T L K R K K C S A
gm011952_Glyma0    L S P Q V E H R A F T P E E D E T I I R A H A R F G N K W A T I A R L L - S G R T D N A I K N H W N S T L K R K C A S F
gm008871_Glyma0    L S P E V E R R P F T A E E D E A I L K A H A R F G N K W A T I A R F L - N G R T D N A I K N H W N S T L K R K C S E P
gm039420_Glyma1    L S P Q V A H R P F S Q E E D E A I I M A H A K F G N K W A T I A R L L - N G R T D N A V K N H W N S T L K R K S - S A
 
AT5G67300.1     D H R G Y D G - S E D H R P V K R S V S A G S P P - V V T G L Y - - - M S P G S P T G S D V S D S S T I P I L P S V E L
gm029895_Glyma1    M I - - D D - - - - N T Q P L K R S V S A G A A I P V S T G L Y M N P P T P G S P S G S D V S E S S - - - - L P - - - -
gm047970_Glyma1    V S - - D D - - V T D R P P L K R S A S V G P A H - - - - - - - - - - L N P G S P S G S D L S D P S - - - - L P A L - -
gm011952_Glyma0    M M A G D E A V A V S P R P L K R S F S A G A A V - - - - - - - - - - P P P G S P S G S D F S E S S - - - - A P G V - -
gm008871_Glyma0    L S - - - - - - - - E P R P L K R S A T V S - - - - - - - - - - - - - - - - G S Q S G S D L S D S G - - - - L P I I - -
gm039420_Glyma1    V S - - D D D V V T H R Q P L K R S N S V G P A H - - - - - - - - - - L N P A S P S V S D L S D P G - - - - L P A L - -
 
AT5G67300.1     F K P V P R P G A V V L P L P - - - - - - - - I E T S S S S D D - - - - - P P T S L S L S L P G A - - - D V S E E S N R
gm029895_Glyma1    - - - V A S S S H V F R P V P R T V K V L P P V E T T S S S N D - - - - - P P T S L S L S L P G V G V V D S S E V S N R
gm047970_Glyma1    - - S N P S P S A H Y R P N L - - - - - - - - M E T A S S A C D - - - - - P A T S L S L S L P G F G - - - - - - - - - -
gm011952_Glyma0    - - V S V S P S H V F R P V P - - - - V R P I V E T A S S Q D D A D D A G P A T S L S L S L P G - - - V E S A E I S N R
gm008871_Glyma0    - - L A R S V S V T V A P S N H L - - - - - - A E T A S S S V T - - D - - P A T L L S L S L P G F - - - D S C D G A N N
gm039420_Glyma1    - - S N P S P S A H Y M P N L - - - - - - - - M E T A S S A P D - - - - - P A T S L S L S L P G F - - - - - - - - - - -
 
AT5G67300.1     S H E S T N I N N T T S S R H N H N N T V S F M P F S G G F R G A I E E M G K S F P G N - - - - - - - - - - G G E F M A
gm029895_Glyma1    T T E P I H F - - T P P M P H R S N T M P - L L P M M T S V S A T V M A - - - - - P - - - - - - - - - F N F S A E F R S
gm047970_Glyma1    - - - - - - - - - - - - - - - - S G S N P V C A P R P V S V S P P S P P - - - - - P A E P V E Q R G K Q M F N A E F L R
gm011952_Glyma0    A T - - - - - - - - - - - - - - - - T V P - V M P V N T - V A A P A P V - - - - - P A E V - - G L G A L N L S G E F M A
gm008871_Glyma0    G P G P - - - - - - - - - - - - - N Q G P S C G P F Q E - - - - - - - - - - - - I P - - - M L G S Q K Q L F S Q E F M K
gm039420_Glyma1    - - - - - - - - - - - - - - - - - - - - - - T V P Q P - - V S P P P P P L - - P L P A E T V E E R G K Q M F N A E F L R
 
AT5G67300.1     V V Q E M I K A E V R S Y M T E M Q R N - - - - N G G - G F V G G F I - - - - - - D N G M I P M S Q I G V G R I E -
gm029895_Glyma1    V M Q E M I R K E V R S Y I E L H N Q N G M C F Q A - - A V N D G F R - - - - - - - N A S V - - K R I G I S R V D S
gm047970_Glyma1    V M Q E M I R K E V R S Y M - - - - - - - - - - S G M - E Q K N G F R I P T E A I G N A V V - - K R M G I S N I E -
gm011952_Glyma0    V M H E M I R K E V R S Y M E Q Q K N G M M C F Q G M - E M M E G F R - - - - - - - N V S V - - K R I G I S R V D S
gm008871_Glyma0    V M Q E M I R V E V R N Y M S V L E R N G V C - - - - - M Q T D A I R - - - - - - - N S V L - - E R M G I G R V E -
gm039420_Glyma1    V M Q E M I K K E V R S Y M - - - - - - - - - - S G M E E Q K N G F R M Q T E A I G N A V V - - K R M G I S N I E -
 
0