fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G67411.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047288 not found in 415aa AT3G49950.1 not_not 0.583815028 III
Pt000302 not found in 457aa AT3G49950.1 not_not 0.618497109 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G67411.1     ------------------------------------------------------------
gm047288_Glyma1 ----------------------MNKNQIPRPRPWPASGFPTTSKALSNLGNANCMEQLLV
pt000302_POPTR_ MQSTETPLPHWHQIITPFSNPTMNINQTQRTRHWP--GFP-TSKSLRSFGDANCMEQLLV
                                                                            

AT5G67411.1     ------------------------------------------------------------
gm047288_Glyma1 HCANAIETNDVTLAQQILWVLNNIAPHDGDSNQRLASGFLRALTARAAKTGTCKMLVS--
pt000302_POPTR_ HCANAIESNNATLSQQIVWVLNNIAPPDGDSNQRLTFAFLRALIARATKSCTCKLLAAMA
                                                                            

AT5G67411.1     -----------------------------------------------------------M
gm047288_Glyma1 -AGTNLSIDTHRFNIIELANFVDLTPWHRFGFTAANAAVLEATEGFSVVHIVDLSLTHCM
pt000302_POPTR_ NAHYNLALHTHKFSVIELASFVDVTPWHRFGFTAANAAILEAVEGYLVIHIVDLSLTHCM
                                                                           *

AT5G67411.1     QIPTLIDSMANKLHKK-PPPLLKLTVIASDAEFHPPPLLGISYEELGSKLVNFATTRNVA
gm047288_Glyma1 QIPTLVDAIASRQHHDAPPPIIKLTVADACCRDHIPPMLDLSYEELGAKLVSFARSRNVI
pt000302_POPTR_ QIPTLIDAIANRFE---VPPLIKLTVAGAT--EDVPPMLDLSYEELGSKLVNFAWSRNVI
                *****:*::*.: .    **::****  :    . **:*.:******:***.** :*** 

AT5G67411.1     MEFRIISSSYSDGLSSLIEQLRI---DPFVFNEALVVNCHMMLHYIPDEILTS-------
gm047288_Glyma1 MEFRVVSSSYQDGFAT----------EPSTPSEALVINCHMMLHYIPDETLSD--TTDLT
pt000302_POPTR_ MEFRIIPSSYADGFSSLIEQLRVQHLVHAESGEALVINCHMMLHYIPEETLSDFPSSKSN
                ****::.*** **:::               .****:**********:* *:.       

AT5G67411.1     ------------NLRSVFLKELRDLNPTIVTLIDEDSDFTSTNFISRLRSLYNYMWIPYD
gm047288_Glyma1 SYVYDSSSSA---------ASLRGLDPTVVILVDEDADLTSNNLVCRLRSAFNFLWIPYD
pt000302_POPTR_ PYSYESSCSSMSSFRTTFLKSLRSLDPTIVVLVDEDADLTSNNLDSRLRSAFNYLWIPFD
                                    .**.*:**:* *:***:*:**.*: .**** :*::***:*

AT5G67411.1     TAEMFLTRGSEQRQWYEADISWKIDNVVAKEGAERVERLEPKSR----------------
gm047288_Glyma1 TVDTFLPRGSKQRQWYEADICWKIENVIAHEGLQRVERVEPKNKWEERMKNASFQGVGFS
pt000302_POPTR_ TVDTFLPRGSKQRQWYEADVCWKIMNLIAHEGLQRVERLEPKIQWIQRMRNADFRGISFA
                *.: **.***:********:.*** *::*:** :****:*** :                

AT5G67411.1     ---------------------------------------------
gm047288_Glyma1 EDSVAEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASA----
pt000302_POPTR_ EDAISEVKTMLDEHAAGWGLKKEDDDLVLTWKGHNVVFASAWLPV
BoxShade v3.31 C (beta, 970507) Output
AT5G67411.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm047288_Glyma1    - - - - - - - - - - - - - - - - - - - - - - M N K N Q I P R P R P W P A S G F P T T S K A L S N L G N A N C M E Q L L V
pt000302_POPTR_    M Q S T E T P L P H W H Q I I T P F S N P T M N I N Q T Q R T R H W P - - G F P - T S K S L R S F G D A N C M E Q L L V
 
AT5G67411.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm047288_Glyma1    H C A N A I E T N D V T L A Q Q I L W V L N N I A P H D G D S N Q R L A S G F L R A L T A R A A K T G T C K M L V S - -
pt000302_POPTR_    H C A N A I E S N N A T L S Q Q I V W V L N N I A P P D G D S N Q R L T F A F L R A L I A R A T K S C T C K L L A A M A
 
AT5G67411.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M
gm047288_Glyma1    - A G T N L S I D T H R F N I I E L A N F V D L T P W H R F G F T A A N A A V L E A T E G F S V V H I V D L S L T H C M
pt000302_POPTR_    N A H Y N L A L H T H K F S V I E L A S F V D V T P W H R F G F T A A N A A I L E A V E G Y L V I H I V D L S L T H C M
 
AT5G67411.1     Q I P T L I D S M A N K L H K K - P P P L L K L T V I A S D A E F H P P P L L G I S Y E E L G S K L V N F A T T R N V A
gm047288_Glyma1    Q I P T L V D A I A S R Q H H D A P P P I I K L T V A D A C C R D H I P P M L D L S Y E E L G A K L V S F A R S R N V I
pt000302_POPTR_    Q I P T L I D A I A N R F E - - - V P P L I K L T V A G A T - - E D V P P M L D L S Y E E L G S K L V N F A W S R N V I
 
AT5G67411.1     M E F R I I S S S Y S D G L S S L I E Q L R I - - - D P F V F N E A L V V N C H M M L H Y I P D E I L T S - - - - - - -
gm047288_Glyma1    M E F R V V S S S Y Q D G F A T - - - - - - - - - - E P S T P S E A L V I N C H M M L H Y I P D E T L S D - - T T D L T
pt000302_POPTR_    M E F R I I P S S Y A D G F S S L I E Q L R V Q H L V H A E S G E A L V I N C H M M L H Y I P E E T L S D F P S S K S N
 
AT5G67411.1     - - - - - - - - - - - - N L R S V F L K E L R D L N P T I V T L I D E D S D F T S T N F I S R L R S L Y N Y M W I P Y D
gm047288_Glyma1    S Y V Y D S S S S A - - - - - - - - - A S L R G L D P T V V I L V D E D A D L T S N N L V C R L R S A F N F L W I P Y D
pt000302_POPTR_    P Y S Y E S S C S S M S S F R T T F L K S L R S L D P T I V V L V D E D A D L T S N N L D S R L R S A F N Y L W I P F D
 
AT5G67411.1     T A E M F L T R G S E Q R Q W Y E A D I S W K I D N V V A K E G A E R V E R L E P K S R - - - - - - - - - - - - - - - -
gm047288_Glyma1    T V D T F L P R G S K Q R Q W Y E A D I C W K I E N V I A H E G L Q R V E R V E P K N K W E E R M K N A S F Q G V G F S
pt000302_POPTR_    T V D T F L P R G S K Q R Q W Y E A D V C W K I M N L I A H E G L Q R V E R L E P K I Q W I Q R M R N A D F R G I S F A
 
AT5G67411.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm047288_Glyma1    E D S V A E V K A M L D E H A A G W G L K K E D E H I V L T W K G H N V V F A S A - - - -
pt000302_POPTR_    E D A I S E V K T M L D E H A A G W G L K K E D D D L V L T W K G H N V V F A S A W L P V
 
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