fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G67411.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt036466 not found in 451aa AT3G49950.1 1st_not 0.638728323 II
Pt000302 not found in 457aa AT3G49950.1 not_not 0.618497109 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G67411.1     ------------------------------------------------------------
pt000302_POPTR_ MQSTETPLPHWHQIITPFSNPTMNINQTQRTRHWPGFPTSKSLRSFGDANCMEQLLVHCA
pt036466_POPTR_ MQFTETPLPTLHQIITPISNPTMN-----RNRPWPGFPTSKSLGSFGDANCMEQLLVHCV
                                                                            

AT5G67411.1     ------------------------------------------------------------
pt000302_POPTR_ NAIESNNATLSQQIVWVLNNIAPPDGDSNQRLTFAFLRALIARATKSCTCKLLAAMANAH
pt036466_POPTR_ NAIESNDATLSQQILWVLNNIAPPDGDSNQRLTCAFLRALIARAAKSGTCKLLAAMENAH
                                                                            

AT5G67411.1     --------------------------------------------------------MQIP
pt000302_POPTR_ YNLALHTHKFSVIELASFVDVTPWHRFGFTAANAAILEAVEGYLVIHIVDLSLTHCMQIP
pt036466_POPTR_ CNLAIDTHKFSIIELASFVDLTPWHRFGYTAANAAILEAVEGYLVIHIVDLSLTHCMQIP
                                                                        ****

AT5G67411.1     TLIDSMANKLHKKPPPLLKLTVIASDAEFHPPPLLGISYEELGSKLVNFATTRNVAMEFR
pt000302_POPTR_ TLIDAIANRF--EVPPLIKLTVAGATEDV--PPMLDLSYEELGSKLVNFAWSRNVIMEFR
pt036466_POPTR_ TLVDAIANRF--EVPPLIKLTVAGATEDV--PPLLDLSYEELGSKLVNFARSRNIIMEFR
                **:*::**::  : ***:**** .:  :.  **:*.:************* :**: ****

AT5G67411.1     IISSSYSDGLSSLIEQLRIDPFVF---NEALVVNCHMMLHYIPDEILTS-----------
pt000302_POPTR_ IIPSSYADGFSSLIEQLRVQHLVHAESGEALVINCHMMLHYIPEETLSDFPSSKSNPYSY
pt036466_POPTR_ VIPSSYADGFSSFIEQLRVQHLVYAESGEALVINCHMMLHYIPEETLSGIPSTNSNTYSY
                :*.***:**:**:*****:: :*.   .****:**********:* *:.           

AT5G67411.1     --------NLRSVFLKELRDLNPTIVTLIDEDSDFTSTNFISRLRSLYNYMWIPYDTAEM
pt000302_POPTR_ ESSCSSMSSFRTTFLKSLRSLDPTIVVLVDEDADLTSNNLDSRLRSAFNYLWIPFDTVDT
pt036466_POPTR_ ESSSSSM-SFRTMFLKSLRSLDPTLVVLVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDT
                        .:*: ***.**.*:**:*.*:***:*:**.*: .**** :**:***:**.: 

AT5G67411.1     FLTRGSEQRQWYEADISWKIDNVVAKEGAERVERLEPKSR--------------------
pt000302_POPTR_ FLPRGSKQRQWYEADVCWKIMNLIAHEGLQRVERLEPKIQWIQRMRNADFRGISFAEDAI
pt036466_POPTR_ FLPRGSRQRQWYEADICWKIENVIAHEGPQRVERLEPKCRWIQRMRNANFRGISFADDAI
                **.***.********:.*** *::*:** :******** :                    

AT5G67411.1     -----------------------------------------
pt000302_POPTR_ SEVKTMLDEHAAGWGLKKEDDDLVLTWKGHNVVFASAWLPV
pt036466_POPTR_ SEVKTMLDEHAAGWGLKKEDDDIVLTWKGHNVVFASAWLPA
BoxShade v3.31 C (beta, 970507) Output
AT5G67411.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt000302_POPTR_    M Q S T E T P L P H W H Q I I T P F S N P T M N I N Q T Q R T R H W P G F P T S K S L R S F G D A N C M E Q L L V H C A
pt036466_POPTR_    M Q F T E T P L P T L H Q I I T P I S N P T M N - - - - - R N R P W P G F P T S K S L G S F G D A N C M E Q L L V H C V
 
AT5G67411.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt000302_POPTR_    N A I E S N N A T L S Q Q I V W V L N N I A P P D G D S N Q R L T F A F L R A L I A R A T K S C T C K L L A A M A N A H
pt036466_POPTR_    N A I E S N D A T L S Q Q I L W V L N N I A P P D G D S N Q R L T C A F L R A L I A R A A K S G T C K L L A A M E N A H
 
AT5G67411.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Q I P
pt000302_POPTR_    Y N L A L H T H K F S V I E L A S F V D V T P W H R F G F T A A N A A I L E A V E G Y L V I H I V D L S L T H C M Q I P
pt036466_POPTR_    C N L A I D T H K F S I I E L A S F V D L T P W H R F G Y T A A N A A I L E A V E G Y L V I H I V D L S L T H C M Q I P
 
AT5G67411.1     T L I D S M A N K L H K K P P P L L K L T V I A S D A E F H P P P L L G I S Y E E L G S K L V N F A T T R N V A M E F R
pt000302_POPTR_    T L I D A I A N R F - - E V P P L I K L T V A G A T E D V - - P P M L D L S Y E E L G S K L V N F A W S R N V I M E F R
pt036466_POPTR_    T L V D A I A N R F - - E V P P L I K L T V A G A T E D V - - P P L L D L S Y E E L G S K L V N F A R S R N I I M E F R
 
AT5G67411.1     I I S S S Y S D G L S S L I E Q L R I D P F V F - - - N E A L V V N C H M M L H Y I P D E I L T S - - - - - - - - - - -
pt000302_POPTR_    I I P S S Y A D G F S S L I E Q L R V Q H L V H A E S G E A L V I N C H M M L H Y I P E E T L S D F P S S K S N P Y S Y
pt036466_POPTR_    V I P S S Y A D G F S S F I E Q L R V Q H L V Y A E S G E A L V I N C H M M L H Y I P E E T L S G I P S T N S N T Y S Y
 
AT5G67411.1     - - - - - - - - N L R S V F L K E L R D L N P T I V T L I D E D S D F T S T N F I S R L R S L Y N Y M W I P Y D T A E M
pt000302_POPTR_    E S S C S S M S S F R T T F L K S L R S L D P T I V V L V D E D A D L T S N N L D S R L R S A F N Y L W I P F D T V D T
pt036466_POPTR_    E S S S S S M - S F R T M F L K S L R S L D P T L V V L V D E D A D L T S N N L V C R L R S A F N Y L W I P Y D T V D T
 
AT5G67411.1     F L T R G S E Q R Q W Y E A D I S W K I D N V V A K E G A E R V E R L E P K S R - - - - - - - - - - - - - - - - - - - -
pt000302_POPTR_    F L P R G S K Q R Q W Y E A D V C W K I M N L I A H E G L Q R V E R L E P K I Q W I Q R M R N A D F R G I S F A E D A I
pt036466_POPTR_    F L P R G S R Q R Q W Y E A D I C W K I E N V I A H E G P Q R V E R L E P K C R W I Q R M R N A N F R G I S F A D D A I
 
AT5G67411.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt000302_POPTR_    S E V K T M L D E H A A G W G L K K E D D D L V L T W K G H N V V F A S A W L P V
pt036466_POPTR_    S E V K T M L D E H A A G W G L K K E D D D I V L T W K G H N V V F A S A W L P A
 
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