fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G67411.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb006681 PHAAGGLGLGLFLDVG in 18/455 AT3G49950.1 1st_not 0.575144508 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G67411.1     ------------------------------------------------------------
Sb006681_Sorbi1 MMQFTHTAPPPPPHAAGGLGLGLFLDVGAPRAARGPWPGSFPTPASKISLGNLNSTSCME
                                                                            

AT5G67411.1     ------------------------------------------------------------
Sb006681_Sorbi1 QLLVHCANAIEANDATLTQQILWVLNNIAPPDGDSNQRLTAAFLCALVARASRTGACKAV
                                                                            

AT5G67411.1     ------------------------------------------------------------
Sb006681_Sorbi1 TAAVAAAVESAALHVHRFTAVELASFVDLTPWHRFGYTAANAAILEAVEGFPVVHVVELG
                                                                            

AT5G67411.1     ----MQIPTLIDSMANKLHKKPPPLLKLTVIASDAEFHPPPLLGISYEELGSKLVNFATT
Sb006681_Sorbi1 TTHCMQIPTLIDMLASR--AEGPPILRLTV-ADVAPSAPPPALDMSYEELGAKLVNFARS
                    ******** :*.:   : **:*:*** *. *   *** *.:******:****** :

AT5G67411.1     RNVAMEFRIISSSYSDGLSSLIEQLRIDPFVFN--EALVVNCHMMLHYIPDEILTS----
Sb006681_Sorbi1 RNMSMDFRVVPTSPADALTSLVDQLRVQQLVLDGTEALVVNCHMLLHTVPDETAGSVSLT
                **::*:**::.:* :*.*:**::***:: :*::  *********:** :***   *    

AT5G67411.1     ---NLRSVFLKELRDLNPTIVTLIDEDSDFTSTNFISRLRSLYNYMWIPYDTAEMFLTRG
Sb006681_Sorbi1 QPVSLRTMLLKSLRTLDPNLVVVVEEDADFTAGDVVGRLRAAFNFLWIPYDAVDTFLPKG
                   .**:::**.** *:*.:*.:::**:***: :.:.***: :*::*****:.: **.:*

AT5G67411.1     SEQRQWYEADISWKIDNVVAKEGAERVERLEPKSR-------------------------
Sb006681_Sorbi1 SEQRRWYEAEIGWKVENVLAQEGVERVERQEDRGRWGQRMRSAGFRAVAFGEEAAGEVKA
                ****:****:*.**::**:*:**.***** * :.*                         

AT5G67411.1     --------------------------------------
Sb006681_Sorbi1 MLNEHAAGWGMKREDDDLVLTWKGHNVVFASAWAPSPS
BoxShade v3.31 C (beta, 970507) Output
AT5G67411.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb006681_Sorbi1    M M Q F T H T A P P P P P H A A G G L G L G L F L D V G A P R A A R G P W P G S F P T P A S K I S L G N L N S T S C M E
 
AT5G67411.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb006681_Sorbi1    Q L L V H C A N A I E A N D A T L T Q Q I L W V L N N I A P P D G D S N Q R L T A A F L C A L V A R A S R T G A C K A V
 
AT5G67411.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb006681_Sorbi1    T A A V A A A V E S A A L H V H R F T A V E L A S F V D L T P W H R F G Y T A A N A A I L E A V E G F P V V H V V E L G
 
AT5G67411.1     - - - - M Q I P T L I D S M A N K L H K K P P P L L K L T V I A S D A E F H P P P L L G I S Y E E L G S K L V N F A T T
Sb006681_Sorbi1    T T H C M Q I P T L I D M L A S R - - A E G P P I L R L T V - A D V A P S A P P P A L D M S Y E E L G A K L V N F A R S
 
AT5G67411.1     R N V A M E F R I I S S S Y S D G L S S L I E Q L R I D P F V F N - - E A L V V N C H M M L H Y I P D E I L T S - - - -
Sb006681_Sorbi1    R N M S M D F R V V P T S P A D A L T S L V D Q L R V Q Q L V L D G T E A L V V N C H M L L H T V P D E T A G S V S L T
 
AT5G67411.1     - - - N L R S V F L K E L R D L N P T I V T L I D E D S D F T S T N F I S R L R S L Y N Y M W I P Y D T A E M F L T R G
Sb006681_Sorbi1    Q P V S L R T M L L K S L R T L D P N L V V V V E E D A D F T A G D V V G R L R A A F N F L W I P Y D A V D T F L P K G
 
AT5G67411.1     S E Q R Q W Y E A D I S W K I D N V V A K E G A E R V E R L E P K S R - - - - - - - - - - - - - - - - - - - - - - - - -
Sb006681_Sorbi1    S E Q R R W Y E A E I G W K V E N V L A Q E G V E R V E R Q E D R G R W G Q R M R S A G F R A V A F G E E A A G E V K A
 
AT5G67411.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb006681_Sorbi1    M L N E H A A G W G M K R E D D D L V L T W K G H N V V F A S A W A P S P S
 
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