fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G67411.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047288 not found in 415aa AT3G49950.1 not_not 0.583815028 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G67411.1     ------------------------------------------------------------
gm047288_Glyma1 MNKNQIPRPRPWPASGFPTTSKALSNLGNANCMEQLLVHCANAIETNDVTLAQQILWVLN
                                                                            

AT5G67411.1     ------------------------------------------------------------
gm047288_Glyma1 NIAPHDGDSNQRLASGFLRALTARAAKTGTCKMLVSAGTNLSIDTHRFNIIELANFVDLT
                                                                            

AT5G67411.1     ----------------------------------MQIPTLIDSMANKLHKK-PPPLLKLT
gm047288_Glyma1 PWHRFGFTAANAAVLEATEGFSVVHIVDLSLTHCMQIPTLVDAIASRQHHDAPPPIIKLT
                                                  ******:*::*.: *:. ***::***

AT5G67411.1     VIASDAEFHPPPLLGISYEELGSKLVNFATTRNVAMEFRIISSSYSDGLSSLIEQLRIDP
gm047288_Glyma1 VADACCRDHIPPMLDLSYEELGAKLVSFARSRNVIMEFRVVSSSYQDGFAT-------EP
                *  : .. * **:*.:******:***.** :*** ****::****.**:::       :*

AT5G67411.1     FVFNEALVVNCHMMLHYIPDEIL--TSNLRSVFLK------ELRDLNPTIVTLIDEDSDF
gm047288_Glyma1 STPSEALVINCHMMLHYIPDETLSDTTDLTSYVYDSSSSAASLRGLDPTVVILVDEDADL
                 . .****:************ *  *::* * . .      .**.*:**:* *:***:*:

AT5G67411.1     TSTNFISRLRSLYNYMWIPYDTAEMFLTRGSEQRQWYEADISWKIDNVVAKEGAERVERL
gm047288_Glyma1 TSNNLVCRLRSAFNFLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGLQRVERV
                **.*::.**** :*::******.: **.***:*********.***:**:*:** :****:

AT5G67411.1     EPKSR-------------------------------------------------------
gm047288_Glyma1 EPKNKWEERMKNASFQGVGFSEDSVAEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFA
                ***.:                                                       

AT5G67411.1     --
gm047288_Glyma1 SA
BoxShade v3.31 C (beta, 970507) Output
AT5G67411.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm047288_Glyma1    M N K N Q I P R P R P W P A S G F P T T S K A L S N L G N A N C M E Q L L V H C A N A I E T N D V T L A Q Q I L W V L N
 
AT5G67411.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm047288_Glyma1    N I A P H D G D S N Q R L A S G F L R A L T A R A A K T G T C K M L V S A G T N L S I D T H R F N I I E L A N F V D L T
 
AT5G67411.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Q I P T L I D S M A N K L H K K - P P P L L K L T
gm047288_Glyma1    P W H R F G F T A A N A A V L E A T E G F S V V H I V D L S L T H C M Q I P T L V D A I A S R Q H H D A P P P I I K L T
 
AT5G67411.1     V I A S D A E F H P P P L L G I S Y E E L G S K L V N F A T T R N V A M E F R I I S S S Y S D G L S S L I E Q L R I D P
gm047288_Glyma1    V A D A C C R D H I P P M L D L S Y E E L G A K L V S F A R S R N V I M E F R V V S S S Y Q D G F A T - - - - - - - E P
 
AT5G67411.1     F V F N E A L V V N C H M M L H Y I P D E I L - - T S N L R S V F L K - - - - - - E L R D L N P T I V T L I D E D S D F
gm047288_Glyma1    S T P S E A L V I N C H M M L H Y I P D E T L S D T T D L T S Y V Y D S S S S A A S L R G L D P T V V I L V D E D A D L
 
AT5G67411.1     T S T N F I S R L R S L Y N Y M W I P Y D T A E M F L T R G S E Q R Q W Y E A D I S W K I D N V V A K E G A E R V E R L
gm047288_Glyma1    T S N N L V C R L R S A F N F L W I P Y D T V D T F L P R G S K Q R Q W Y E A D I C W K I E N V I A H E G L Q R V E R V
 
AT5G67411.1     E P K S R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm047288_Glyma1    E P K N K W E E R M K N A S F Q G V G F S E D S V A E V K A M L D E H A A G W G L K K E D E H I V L T W K G H N V V F A
 
AT5G67411.1     - -
gm047288_Glyma1    S A
 
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