fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G67411.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm011993 not found in 441aa AT3G49950.1 1st_not 0.612716763 II
Gm047288 not found in 415aa AT3G49950.1 not_not 0.583815028 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G67411.1     ------------------------------------------------------------
gm011993_Glyma0 MNESQFPRPGPWASACFPTTSKALSNFGDANCMEQLLVHCANAIETNDVTLAQQILWVLN
gm047288_Glyma1 MNKNQIPRPRPWPASGFPTTSKALSNLGNANCMEQLLVHCANAIETNDVTLAQQILWVLN
                                                                            

AT5G67411.1     ------------------------------------------------------------
gm011993_Glyma0 NIAPPDGDSNQRLASGFLRALTARAAKTGTCKMLVPAGGTNLSIDTHRFNVIELANFVDL
gm047288_Glyma1 NIAPHDGDSNQRLASGFLRALTARAAKTGTCKMLVSA-GTNLSIDTHRFNIIELANFVDL
                                                                            

AT5G67411.1     -----------------------------------MQIPTLIDSMANK-LHKKPPPLLKL
gm011993_Glyma0 TPWHRFGFTAANAAILEATEGFSVIHIVDLSLTHCMQIPTLVDAIASRNYHEVPPPIIKL
gm047288_Glyma1 TPWHRFGFTAANAAVLEATEGFSVVHIVDLSLTHCMQIPTLVDAIASRQHHDAPPPIIKL
                                                   ******:*::*.:  *. ***::**

AT5G67411.1     TVIASDAEF--HPPPLLGISYEELGSKLVNFATTRNVAMEFRIISSSYSDGLSSLIEQLR
gm011993_Glyma0 TV-AADASFRDNIPPMLDLSYDELGAKLVNFARSRNMVMEFRVVSSSYRDGFAGLIEHLR
gm047288_Glyma1 TV--ADACCRDHIPPMLDLSYEELGAKLVSFARSRNVIMEFRVVSSSYQDGF--------
                **  :**    : **:*.:**:***:***.** :**: ****::**** **:        

AT5G67411.1     IDP--FVF--------NEALVVNCHMMLHYIPDEIL--TSNLRSV---------FLKELR
gm011993_Glyma0 VQQQHFVYAAESRTTPSEALVINCHMMLHYIPDETLSDTTGLTSFLYDSSSLAASSASLR
gm047288_Glyma1 ---------ATEPSTPSEALVINCHMMLHYIPDETLSDTTDLTSYVYDSSS---SAASLR
                                .****:************ *  *:.* *             .**

AT5G67411.1     DLNPTIVTLIDEDSDFTSTNFISRLRSLYNYMWIPYDTAEMFLTRGSEQRQWYEADISWK
gm011993_Glyma0 GLDPTVVILVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWK
gm047288_Glyma1 GLDPTVVILVDEDADLTSNNLVCRLRSAFNFLWIPYDTVDTFLPRGSKQRQWYEADICWK
                .*:**:* *:***:*:**.*::.**** :*::******.: **.***:*********.**

AT5G67411.1     IDNVVAKEGAERVERLEPKSR---------------------------------------
gm011993_Glyma0 IENVIAHEGVQRVERVEPKNRWEQRMKNASFQGVAFSEDSVAEVKAMLDEHAAGWGLKKE
gm047288_Glyma1 IENVIAHEGLQRVERVEPKNKWEERMKNASFQGVGFSEDSVAEVKAMLDEHAAGWGLKKE
                *:**:*:** :****:***.:                                       

AT5G67411.1     ----------------------
gm011993_Glyma0 DEHIVLTWKGHNVVFASAWLPA
gm047288_Glyma1 DEHIVLTWKGHNVVFASA----
BoxShade v3.31 C (beta, 970507) Output
AT5G67411.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm011993_Glyma0    M N E S Q F P R P G P W A S A C F P T T S K A L S N F G D A N C M E Q L L V H C A N A I E T N D V T L A Q Q I L W V L N
gm047288_Glyma1    M N K N Q I P R P R P W P A S G F P T T S K A L S N L G N A N C M E Q L L V H C A N A I E T N D V T L A Q Q I L W V L N
 
AT5G67411.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm011993_Glyma0    N I A P P D G D S N Q R L A S G F L R A L T A R A A K T G T C K M L V P A G G T N L S I D T H R F N V I E L A N F V D L
gm047288_Glyma1    N I A P H D G D S N Q R L A S G F L R A L T A R A A K T G T C K M L V S A - G T N L S I D T H R F N I I E L A N F V D L
 
AT5G67411.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Q I P T L I D S M A N K - L H K K P P P L L K L
gm011993_Glyma0    T P W H R F G F T A A N A A I L E A T E G F S V I H I V D L S L T H C M Q I P T L V D A I A S R N Y H E V P P P I I K L
gm047288_Glyma1    T P W H R F G F T A A N A A V L E A T E G F S V V H I V D L S L T H C M Q I P T L V D A I A S R Q H H D A P P P I I K L
 
AT5G67411.1     T V I A S D A E F - - H P P P L L G I S Y E E L G S K L V N F A T T R N V A M E F R I I S S S Y S D G L S S L I E Q L R
gm011993_Glyma0    T V - A A D A S F R D N I P P M L D L S Y D E L G A K L V N F A R S R N M V M E F R V V S S S Y R D G F A G L I E H L R
gm047288_Glyma1    T V - - A D A C C R D H I P P M L D L S Y E E L G A K L V S F A R S R N V I M E F R V V S S S Y Q D G F - - - - - - - -
 
AT5G67411.1     I D P - - F V F - - - - - - - - N E A L V V N C H M M L H Y I P D E I L - - T S N L R S V - - - - - - - - - F L K E L R
gm011993_Glyma0    V Q Q Q H F V Y A A E S R T T P S E A L V I N C H M M L H Y I P D E T L S D T T G L T S F L Y D S S S L A A S S A S L R
gm047288_Glyma1    - - - - - - - - - A T E P S T P S E A L V I N C H M M L H Y I P D E T L S D T T D L T S Y V Y D S S S - - - S A A S L R
 
AT5G67411.1     D L N P T I V T L I D E D S D F T S T N F I S R L R S L Y N Y M W I P Y D T A E M F L T R G S E Q R Q W Y E A D I S W K
gm011993_Glyma0    G L D P T V V I L V D E D A D L T S N N L V C R L R S A F N Y L W I P Y D T V D T F L P R G S K Q R Q W Y E A D I C W K
gm047288_Glyma1    G L D P T V V I L V D E D A D L T S N N L V C R L R S A F N F L W I P Y D T V D T F L P R G S K Q R Q W Y E A D I C W K
 
AT5G67411.1     I D N V V A K E G A E R V E R L E P K S R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm011993_Glyma0    I E N V I A H E G V Q R V E R V E P K N R W E Q R M K N A S F Q G V A F S E D S V A E V K A M L D E H A A G W G L K K E
gm047288_Glyma1    I E N V I A H E G L Q R V E R V E P K N K W E E R M K N A S F Q G V G F S E D S V A E V K A M L D E H A A G W G L K K E
 
AT5G67411.1     - - - - - - - - - - - - - - - - - - - - - -
gm011993_Glyma0    D E H I V L T W K G H N V V F A S A W L P A
gm047288_Glyma1    D E H I V L T W K G H N V V F A S A - - - -
 
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