fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G67420.1 DQPSSELDLSLIPNFP at 185/250 in AT5G67420.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017662 not found in 208aa AT3G49940.1 not_not 0.441176470 III
Pt040190 not found in 208aa AT4G37540.1 not_not 0.438914027 III
Pt022478 GPMRTDLDLRLMYQRV in 162/207 AT3G49940.1 not_not 0.418552036 III
Pt032094 YGQTTDLDLRLMYQGS in 161/206 AT3G49940.1 not_not 0.407239819 III
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G67420.1     MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR
pt017662_POPTR_ MSCNGCRVLRKGCSETCVLRSCLHWIPTPEAQGNATLFLAKFFGRSDLISLISAVPESQR
pt040190_POPTR_ MSCNGCRVLRKGCSETCVLRSCLHWITNPEAQGNATLFLAKFFGRSDLMSLISAVPEAQR
pt022478_POPTR_ MSCNGCRILRKGCSEDCVLRQCIEWINSPQAQANATVFVAKFFGRAGLMSFISSVPKSQG
pt032094_POPTR_ MSCNGCRVLRKGCSEDCVLRQGIGWINNPQAQANATVFVAKFFGRAGLMSFMSSVPQSQR
                *******:******* *:**  : ** ..:**.:**:*:******:.*:*::*:**.:* 

AT5G67420.1     PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHGGGF
pt017662_POPTR_ PVLFQSLLFEACGRTVNPVNGAVGLLWSGNWHVCQAAVESVLAGETLRPLPGILT---GV
pt040190_POPTR_ PALFQSLLFEACGRTVNPVNGVVGLLWSGNWHMCQEAVETVLSGGALQPLPGILT---GV
pt022478_POPTR_ PSLFRSLLFEAVGRTVNPVTGAVGLLWTGNWHVCQKAVRTVLRRGTVEPQPEL---EGGV
pt032094_POPTR_ PSLFQSLLFEAVGRAVNPVSGAVGLLWTGNWHLCQKAVMAVLRRGTVEPLPEL---EGGV
                * **:***:** **:****.*.:*:**:***::** ** :**   ::.* * :     *.

AT5G67420.1     AGFPSPTSEEASEICTEMLNLQQNDSTDRNIYHHSRFSSSRSRSTMD--SSSPTKRKRLS
pt017662_POPTR_ LA---PNCDESSD----------------------SFSAAAY-------AVHSMTWNQSK
pt040190_POPTR_ LA---PNCDESSD----------------------RFSAAAY-------AVHNMARNQSR
pt022478_POPTR_ FG---PEFDNVSE-------------------------CDSFRPPSDHVSSGSKTLKRKR
pt032094_POPTR_ SG---PEFDSVSE-------------------------SGGFRPPIDHVSSGSQKLKRKR
                 .   *  :. *:                         .          :      ::  

AT5G67420.1     SEDQ-----PSSELDLSLIPNFPIKQATPSSTRRRSVTPSM-NSEDSGTTTTTTAFCDKG
pt017662_POPTR_ PFDKENNNQVVSDHHVNLC----LARGRGGRDKRGRDAVSFYTGGESETTSFES------
pt040190_POPTR_ SFAKENNKEVVSDHRINLC----LARGKGGRDKRGRDAVSFYTGGESETISFES------
pt022478_POPTR_ DVDAAKRGPMRTDLDLRLM-------------YQRVDTP----PEESETTTLESGSGNNC
pt032094_POPTR_ NDDGAKYG-QTTDLDLRLM-------------YQGSESP----SEESETTTLESSLGDNC
                           ::  : *               :   :       :* * :  :      

AT5G67420.1     DVYGNGGGETTKLLNLFV
pt017662_POPTR_ -----SGADKNKLLNLFV
pt040190_POPTR_ -----SGGDKKRLLNLFV
pt022478_POPTR_ RFH--DGGE-PKLLRLFV
pt032094_POPTR_ RFH--EGGE-PKLLRLFV
                      *.:  :**.***
BoxShade v3.31 C (beta, 970507) Output
AT5G67420.1     M S C N G C R V L R K G C S E N C I L R P C I Q W I E T A D A Q G H A T V F V A K F F G R A G L M S F I S A V P D S Q R
pt017662_POPTR_    M S C N G C R V L R K G C S E T C V L R S C L H W I P T P E A Q G N A T L F L A K F F G R S D L I S L I S A V P E S Q R
pt040190_POPTR_    M S C N G C R V L R K G C S E T C V L R S C L H W I T N P E A Q G N A T L F L A K F F G R S D L M S L I S A V P E A Q R
pt022478_POPTR_    M S C N G C R I L R K G C S E D C V L R Q C I E W I N S P Q A Q A N A T V F V A K F F G R A G L M S F I S S V P K S Q G
pt032094_POPTR_    M S C N G C R V L R K G C S E D C V L R Q G I G W I N N P Q A Q A N A T V F V A K F F G R A G L M S F M S S V P Q S Q R
 
AT5G67420.1     P A L F Q S L L Y E A C G R T V N P V N G A I G M L W T G N W N I C Q A A V E T V L R G G S L R P I P E L L T H G G G F
pt017662_POPTR_    P V L F Q S L L F E A C G R T V N P V N G A V G L L W S G N W H V C Q A A V E S V L A G E T L R P L P G I L T - - - G V
pt040190_POPTR_    P A L F Q S L L F E A C G R T V N P V N G V V G L L W S G N W H M C Q E A V E T V L S G G A L Q P L P G I L T - - - G V
pt022478_POPTR_    P S L F R S L L F E A V G R T V N P V T G A V G L L W T G N W H V C Q K A V R T V L R R G T V E P Q P E L - - - E G G V
pt032094_POPTR_    P S L F Q S L L F E A V G R A V N P V S G A V G L L W T G N W H L C Q K A V M A V L R R G T V E P L P E L - - - E G G V
 
AT5G67420.1     A G F P S P T S E E A S E I C T E M L N L Q Q N D S T D R N I Y H H S R F S S S R S R S T M D - - S S S P T K R K R L S
pt017662_POPTR_    L A - - - P N C D E S S D - - - - - - - - - - - - - - - - - - - - - - S F S A A A Y - - - - - - - A V H S M T W N Q S K
pt040190_POPTR_    L A - - - P N C D E S S D - - - - - - - - - - - - - - - - - - - - - - R F S A A A Y - - - - - - - A V H N M A R N Q S R
pt022478_POPTR_    F G - - - P E F D N V S E - - - - - - - - - - - - - - - - - - - - - - - - - C D S F R P P S D H V S S G S K T L K R K R
pt032094_POPTR_    S G - - - P E F D S V S E - - - - - - - - - - - - - - - - - - - - - - - - - S G G F R P P I D H V S S G S Q K L K R K R
 
AT5G67420.1     S E D Q - - - - - P S S E L D L S L I P N F P I K Q A T P S S T R R R S V T P S M - N S E D S G T T T T T T A F C D K G
pt017662_POPTR_    P F D K E N N N Q V V S D H H V N L C - - - - L A R G R G G R D K R G R D A V S F Y T G G E S E T T S F E S - - - - - -
pt040190_POPTR_    S F A K E N N K E V V S D H R I N L C - - - - L A R G K G G R D K R G R D A V S F Y T G G E S E T I S F E S - - - - - -
pt022478_POPTR_    D V D A A K R G P M R T D L D L R L M - - - - - - - - - - - - - Y Q R V D T P - - - - P E E S E T T T L E S G S G N N C
pt032094_POPTR_    N D D G A K Y G - Q T T D L D L R L M - - - - - - - - - - - - - Y Q G S E S P - - - - S E E S E T T T L E S S L G D N C
 
AT5G67420.1     D V Y G N G G G E T T K L L N L F V
pt017662_POPTR_    - - - - - S G A D K N K L L N L F V
pt040190_POPTR_    - - - - - S G G D K K R L L N L F V
pt022478_POPTR_    R F H - - D G G E - P K L L R L F V
pt032094_POPTR_    R F H - - E G G E - P K L L R L F V
 
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