fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
ATMG00940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038819 TEGVNALELSLTSSYT in 563/594 AT1G77850.1 1st_not 0.428152492 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


ATMG00940.1     ------------------------------------------------------------
pt038819_POPTR_ MPQPQLTELSRVDPRFWRACAGSSVQIPAVNSRVYYFPQGHFEQSSSSTAPHPPFLTNLA
                                                                            

ATMG00940.1     ------------------------------------------------------------
pt038819_POPTR_ LSKPSIPCQISAVDFLADPVTDEVFTRLLLIPLDNPFSNLPLSFLEPCRSEGEGANDVDD
                                                                            

ATMG00940.1     ------------------------------------------------------------
pt038819_POPTR_ DERKILAFSKILTPSDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVADIHGVSWDF
                                                                            

ATMG00940.1     ----------------------------------MRKSADEMFIGVRRAPISSNVGGTSF
pt038819_POPTR_ RHIYRGTPRRHLLTTGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRA--------VRF
                                                  **:  .*********        . *

ATMG00940.1     YGGDEYCSYYQSNGGVAKEDDGSAK--KGFRRTGKGKLTAEAVSEAINRAAQGLPFEVVY
pt038819_POPTR_ NNSARWREQVSDSGG-----DGKVKVEEGFSRSWRGRLSQEAVVEAVERAAKGLPFEVVY
                 .. .: .  ...**     **..*  :** *: :*:*: *** **::***:********

ATMG00940.1     YPTAGW-SDFVVKAEDVEASMAIFWTPGTRVKMAMETEDSSRITWFQGIVFYT-YQETGP
pt038819_POPTR_ YPRAGWYSDFVVRAEVVEAALRVFWTAGMRVKMAVETEDSSRMTWFQGTVSGTGLPDCGA
                ** *** *****:** ***:: :***.* *****:*******:***** *  *   : *.

ATMG00940.1     WRGSPWNSFR-----------------YKIPF---TIPL---------------------
pt038819_POPTR_ WRGSPWRMLQITWDEPEVLQNVKRVSPWQVEFVATTLPLQDASPPMKKLRYPNDSGFLTN
                ******. ::                 ::: *   *:**                     

ATMG00940.1     --IFL-------------------------------------------------------
pt038819_POPTR_ GELFFPMSDLTNSRTGHMNASMLNYSTFPAGMQGARQDPFSTFSLSNLISENASQVFGDK
                  :*:                                                       

ATMG00940.1     ------------------------------------------------------------
pt038819_POPTR_ VFGNNLVPKMKRMPSEMNIGSLQSGDLSPESQSSAHSFGKDFTGNRSFNPKKVGISSIQL
                                                                            

ATMG00940.1     ------------------------------------------------------------
pt038819_POPTR_ FGKIIHMNQPVENGFDSVGFMDNSSKGCNETEGVNALELSLTSSYTELLNRIDVQCQSAS
                                                                            

ATMG00940.1     -------
pt038819_POPTR_ AVEACSA
BoxShade v3.31 C (beta, 970507) Output
ATMG00940.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt038819_POPTR_    M P Q P Q L T E L S R V D P R F W R A C A G S S V Q I P A V N S R V Y Y F P Q G H F E Q S S S S T A P H P P F L T N L A
 
ATMG00940.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt038819_POPTR_    L S K P S I P C Q I S A V D F L A D P V T D E V F T R L L L I P L D N P F S N L P L S F L E P C R S E G E G A N D V D D
 
ATMG00940.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt038819_POPTR_    D E R K I L A F S K I L T P S D A N N G G G F S V P R F C A D S I F P P L N Y Q A E P P V Q T L T V A D I H G V S W D F
 
ATMG00940.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M R K S A D E M F I G V R R A P I S S N V G G T S F
pt038819_POPTR_    R H I Y R G T P R R H L L T T G W S K F V N N K K L I A G D S V V F M R N L K G E M F I G V R R A - - - - - - - - V R F
 
ATMG00940.1     Y G G D E Y C S Y Y Q S N G G V A K E D D G S A K - - K G F R R T G K G K L T A E A V S E A I N R A A Q G L P F E V V Y
pt038819_POPTR_    N N S A R W R E Q V S D S G G - - - - - D G K V K V E E G F S R S W R G R L S Q E A V V E A V E R A A K G L P F E V V Y
 
ATMG00940.1     Y P T A G W - S D F V V K A E D V E A S M A I F W T P G T R V K M A M E T E D S S R I T W F Q G I V F Y T - Y Q E T G P
pt038819_POPTR_    Y P R A G W Y S D F V V R A E V V E A A L R V F W T A G M R V K M A V E T E D S S R M T W F Q G T V S G T G L P D C G A
 
ATMG00940.1     W R G S P W N S F R - - - - - - - - - - - - - - - - - Y K I P F - - - T I P L - - - - - - - - - - - - - - - - - - - - -
pt038819_POPTR_    W R G S P W R M L Q I T W D E P E V L Q N V K R V S P W Q V E F V A T T L P L Q D A S P P M K K L R Y P N D S G F L T N
 
ATMG00940.1     - - I F L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt038819_POPTR_    G E L F F P M S D L T N S R T G H M N A S M L N Y S T F P A G M Q G A R Q D P F S T F S L S N L I S E N A S Q V F G D K
 
ATMG00940.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt038819_POPTR_    V F G N N L V P K M K R M P S E M N I G S L Q S G D L S P E S Q S S A H S F G K D F T G N R S F N P K K V G I S S I Q L
 
ATMG00940.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt038819_POPTR_    F G K I I H M N Q P V E N G F D S V G F M D N S S K G C N E T E G V N A L E L S L T S S Y T E L L N R I D V Q C Q S A S
 
ATMG00940.1     - - - - - - -
pt038819_POPTR_    A V E A C S A
 
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