fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
ATMG00940.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt002083 TEGVDALELSLTSSYT in 561/592 AT1G77850.1 not_not 0.428152492 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


ATMG00940.1     ------------------------------------------------------------
pt002083_POPTR_ MPQLTELSRVDPRIWRACAGSSVQIPTINSRVYYFPQGHLEQSSSSTAPHPPFLSNLALS
                                                                            

ATMG00940.1     ------------------------------------------------------------
pt002083_POPTR_ KPLISCQISAVDFLADPVTDEVFIRLLLLPLNNHSCNLPLSFLEPSRSEGGGVNDVDDDE
                                                                            

ATMG00940.1     ------------------------------------------------------------
pt002083_POPTR_ NKILAFAKILTPSDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVTDIHGISWDFRH
                                                                            

ATMG00940.1     --------------------------------MRKSADEMFIGVRRAPISSN-------V
pt002083_POPTR_ IYRGTPRRHLLTTGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVRLNNSARWREQI
                                                **:  .*********   .*       :

ATMG00940.1     GGTSFYGGDEYCSYYQSNGGVAKEDDGSAKKGFRRTGKGKLTAEAVSEAINRAAQGLPFE
pt002083_POPTR_ AG----GGGE--------GKVKVEE------GFSMSGRGRLSQEAVAEAVEMAAKGLPFD
                .*    **.*        * *  *:      **  :*:*:*: ***:**:: **:****:

ATMG00940.1     VVYYPTAGW-SDFVVKAEDVEASMAIFWTPGTRVKMAMETEDSSRITWFQGIVFYT-YQE
pt002083_POPTR_ VVYYPRAGWYSDFVVRAEAVEAALGVFWTAGMRVKMAMETEDSSRMTWFQGTVSGTGLPD
                ***** *** *****:** ***::.:***.* *************:***** *  *   :

ATMG00940.1     TGPWRGSPW----------------------------------------NSFRY------
pt002083_POPTR_ SGAWRGSPWRMLQITWDEPEVLQNAKRVSPWQVEFVATTPQLQAAFPPMKKLRYPNDSRF
                :*.******                                        :.:**      

ATMG00940.1     ---------------------------------------KIPFTI-----------PLIF
pt002083_POPTR_ LTDGELFFPMSDLTNSTMGHTNASMLNYSTFPAGMQGARQDPFSTFGLSNFISENAPQVF
                                                       : **:            * :*

ATMG00940.1     L-----------------------------------------------------------
pt002083_POPTR_ SDRAFGNNLVPKMKRMPSEMNIGSLQSENLSPESQSSAYSFGIGFVGNRGFNPKKVGINS
                                                                            

ATMG00940.1     ------------------------------------------------------------
pt002083_POPTR_ IQLFGKIIHMDQPVENGFDDVGFMDDSSKCCNETEGVDALELSLTSSYTELLNRIDAQCQ
                                                                            

ATMG00940.1     ----------
pt002083_POPTR_ RASPVEACPT
BoxShade v3.31 C (beta, 970507) Output
ATMG00940.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt002083_POPTR_    M P Q L T E L S R V D P R I W R A C A G S S V Q I P T I N S R V Y Y F P Q G H L E Q S S S S T A P H P P F L S N L A L S
 
ATMG00940.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt002083_POPTR_    K P L I S C Q I S A V D F L A D P V T D E V F I R L L L L P L N N H S C N L P L S F L E P S R S E G G G V N D V D D D E
 
ATMG00940.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt002083_POPTR_    N K I L A F A K I L T P S D A N N G G G F S V P R F C A D S I F P P L N Y Q A E P P V Q T L T V T D I H G I S W D F R H
 
ATMG00940.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M R K S A D E M F I G V R R A P I S S N - - - - - - - V
pt002083_POPTR_    I Y R G T P R R H L L T T G W S K F V N N K K L I A G D S V V F M R N L K G E M F I G V R R A V R L N N S A R W R E Q I
 
ATMG00940.1     G G T S F Y G G D E Y C S Y Y Q S N G G V A K E D D G S A K K G F R R T G K G K L T A E A V S E A I N R A A Q G L P F E
pt002083_POPTR_    A G - - - - G G G E - - - - - - - - G K V K V E E - - - - - - G F S M S G R G R L S Q E A V A E A V E M A A K G L P F D
 
ATMG00940.1     V V Y Y P T A G W - S D F V V K A E D V E A S M A I F W T P G T R V K M A M E T E D S S R I T W F Q G I V F Y T - Y Q E
pt002083_POPTR_    V V Y Y P R A G W Y S D F V V R A E A V E A A L G V F W T A G M R V K M A M E T E D S S R M T W F Q G T V S G T G L P D
 
ATMG00940.1     T G P W R G S P W - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N S F R Y - - - - - -
pt002083_POPTR_    S G A W R G S P W R M L Q I T W D E P E V L Q N A K R V S P W Q V E F V A T T P Q L Q A A F P P M K K L R Y P N D S R F
 
ATMG00940.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K I P F T I - - - - - - - - - - - P L I F
pt002083_POPTR_    L T D G E L F F P M S D L T N S T M G H T N A S M L N Y S T F P A G M Q G A R Q D P F S T F G L S N F I S E N A P Q V F
 
ATMG00940.1     L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt002083_POPTR_    S D R A F G N N L V P K M K R M P S E M N I G S L Q S E N L S P E S Q S S A Y S F G I G F V G N R G F N P K K V G I N S
 
ATMG00940.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt002083_POPTR_    I Q L F G K I I H M D Q P V E N G F D D V G F M D D S S K C C N E T E G V D A L E L S L T S S Y T E L L N R I D A Q C Q
 
ATMG00940.1     - - - - - - - - - -
pt002083_POPTR_    R A S P V E A C P T
 
0