fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G01010 ANAC001 NAC domain containing protein 1 (.1)

>AT1G01010.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PvuII, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 259
NdeI CA|TATG 440
PstI CTGCA|G 450
SacI GAGCT|C 43, 963
SpeI A|CTAGT 535
StyI C|C[AT][AT]GG 139


Click here to view TAIR data

>AT1G01010.1 length:1290
ATGGAGGATC AAGTTGGGTT TGGGTTCCGT CCGAACGACG AGGAGCTCGT 
50
TGGTCACTAT CTCCGTAACA AAATCGAAGG AAACACTAGC CGCGACGTTG 
100
AAGTAGCCAT CAGCGAGGTC AACATCTGTA GCTACGATCC TTGGAACTTG 
150
CGCTTCCAGT CAAAGTACAA ATCGAGAGAT GCTATGTGGT ACTTCTTCTC 
200
TCGTAGAGAA AACAACAAAG GGAATCGACA GAGCAGGACA ACGGTTTCTG 
250
GTAAATGGAA GCTTACCGGA GAATCTGTTG AGGTCAAGGA CCAGTGGGGA 
300
TTTTGTAGTG AGGGCTTTCG TGGTAAGATT GGTCATAAAA GGGTTTTGGT 
350
GTTCCTCGAT GGAAGATACC CTGACAAAAC CAAATCTGAT TGGGTTATCC 
400
ACGAGTTCCA CTACGACCTC TTACCAGAAC ATCAGAGGAC ATATGTCATC 
450
TGCAGACTTG AGTACAAGGG TGATGATGCG GACATTCTAT CTGCTTATGC 
500
AATAGATCCC ACTCCCGCTT TTGTCCCCAA TATGACTAGT AGTGCAGGTT 
550
CTGTGGTCAA CCAATCACGT CAACGAAATT CAGGATCTTA CAACACTTAC 
600
TCTGAGTATG ATTCAGCAAA TCATGGCCAG CAGTTTAATG AAAACTCTAA 
650
CATTATGCAG CAGCAACCAC TTCAAGGATC ATTCAACCCT CTCCTTGAGT 
700
ATGATTTTGC AAATCACGGC GGTCAGTGGC TGAGTGACTA TATCGACCTG 
750
CAACAGCAAG TTCCTTACTT GGCACCTTAT GAAAATGAGT CGGAGATGAT 
800
TTGGAAGCAT GTGATTGAAG AAAATTTTGA GTTTTTGGTA GATGAAAGGA 
850
CATCTATGCA ACAGCATTAC AGTGATCACC GGCCCAAAAA ACCTGTGTCT 
900
GGGGTTTTGC CTGATGATAG CAGTGATACT GAAACTGGAT CAATGATTTT 
950
CGAAGACACT TCGAGCTCCA CTGATAGTGT TGGTAGTTCA GATGAACCGG 
1000
GCCATACTCG TATAGATGAT ATTCCATCAT TGAACATTAT TGAGCCTTTG 
1050
CACAATTATA AGGCACAAGA GCAACCAAAG CAGCAGAGCA AAGAAAAGGT 
1100
GATAAGTTCG CAGAAAAGCG AATGCGAGTG GAAAATGGCT GAAGACTCGA 
1150
TCAAGATACC TCCATCCACC AACACGGTGA AGCAGAGCTG GATTGTTTTG 
1200
GAGAATGCAC AGTGGAACTA TCTCAAGAAC ATGATCATTG GTGTCTTGTT 
1250
GTTCATCTCC GTCATTAGTT GGATCATTCT TGTTGGTTAA 
1300

>AT1G01010.1 longest ORF length:429
MEDQVGFGFR PNDEELVGHY LRNKIEGNTS RDVEVAISEV NICSYDPWNL 
50
RFQSKYKSRD AMWYFFSRRE NNKGNRQSRT TVSGKWKLTG ESVEVKDQWG 
100
FCSEGFRGKI GHKRVLVFLD GRYPDKTKSD WVIHEFHYDL LPEHQRTYVI 
150
CRLEYKGDDA DILSAYAIDP TPAFVPNMTS SAGSVVNQSR QRNSGSYNTY 
200
SEYDSANHGQ QFNENSNIMQ QQPLQGSFNP LLEYDFANHG GQWLSDYIDL 
250
QQQVPYLAPY ENESEMIWKH VIEENFEFLV DERTSMQQHY SDHRPKKPVS 
300
GVLPDDSSDT ETGSMIFEDT SSSTDSVGSS DEPGHTRIDD IPSLNIIEPL 
350
HNYKAQEQPK QQSKEKVISS QKSECEWKMA EDSIKIPPST NTVKQSWIVL 
400
ENAQWNYLKN MIIGVLLFIS VISWIILVG
450