fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G01030 NGA3 NGATHA3, AP2/B3-like transcriptional factor family protein (.1)

>AT1G01030.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
SmaI CCC|GGG 784
XbaI T|CTAGA 249


Click here to view TAIR data

>AT1G01030.1 length:1077
ATGGATCTAT CCCTGGCTCC GACAACAACA ACAAGTTCCG ACCAAGAACA 
50
AGACAGAGAC CAAGAATTAA CCTCCAACAT CGGAGCAAGC AGCAGCTCCG 
100
GTCCCAGCGG AAACAACAAC AACCTTCCGA TGATGATGAT TCCACCTCCG 
150
GAGAAAGAAC ACATGTTCGA CAAAGTGGTA ACACCAAGCG ACGTCGGAAA 
200
ACTCAACAGA CTCGTGATCC CTAAACAACA CGCTGAGAGG TATTTCCCTC 
250
TAGACTCCTC AAACAACCAA AACGGCACGC TTTTGAACTT CCAAGACAGA 
300
AACGGCAAGA TGTGGAGATT CCGTTACTCG TATTGGAACT CTAGCCAGAG 
350
CTACGTTATG ACCAAAGGAT GGAGCCGTTT CGTCAAAGAG AAAAAGCTCG 
400
ATGCAGGAGA CATTGTCTCT TTCCAACGAG GCATCGGAGA TGAGTCAGAA 
450
AGATCCAAAC TTTACATAGA TTGGAGGCAT AGACCCGACA TGAGCCTCGT 
500
TCAAGCACAT CAGTTTGGTA ATTTTGGTTT CAATTTCAAT TTCCCGACCA 
550
CTTCTCAATA TTCCAACAGA TTTCATCCAT TGCCAGAATA TAACTCCGTC 
600
CCGATTCACC GGGGCTTAAA CATCGGAAAT CACCAACGTT CCTATTATAA 
650
CACCCAGCGT CAAGAGTTCG TAGGGTATGG TTATGGGAAT TTAGCTGGAA 
700
GGTGTTACTA CACGGGATCA CCGTTGGATC ATAGGAACAT TGTTGGATCA 
750
GAGCCGTTGG TTATAGACTC AGTCCCTGTG GTTCCCGGGA GATTAACTCC 
800
GGTGATGTTA CCGCCGCTTC CTCCGCCTCC TTCTACGGCG GGAAAGAGAC 
850
TAAGGCTCTT TGGGGTGAAT ATGGAATGTG GCAATGACTA TAATCAACAA 
900
GAAGAGTCAT GGTTGGTGCC ACGTGGCGAA ATTGGTGCAT CTTCTTCTTC 
950
TTCTTCAGCT CTACGACTAA ATTTATCGAC TGATCATGAT GATGATAATG 
1000
ATGATGGTGA TGATGGCGAT GATGATCAAT TTGCTAAGAA AGGGAAGTCT 
1050
TCACTTTCTC TCAATTTCAA TCCATGA
1100

>AT1G01030.1 longest ORF length:358
MDLSLAPTTT TSSDQEQDRD QELTSNIGAS SSSGPSGNNN NLPMMMIPPP 
50
EKEHMFDKVV TPSDVGKLNR LVIPKQHAER YFPLDSSNNQ NGTLLNFQDR 
100
NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE 
150
RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV 
200
PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS 
250
EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ 
300
EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS 
350
SLSLNFNP
400