fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G01350 Zinc finger (CCCH-type/C3HC4-type RING finger) family protein (.1)

>AT1G01350.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
EcoRI G|AATTC 473
SacI GAGCT|C 272
StyI C|C[AT][AT]GG 308
XhoI C|TCGAG 525


Click here to view TAIR data

>AT1G01350.1 length:1032
ATGTCAGATT CTGGTGAGCC TAAACCTTCT CAGCAAGAAG AACCTCTACC 
50
TCAACCTGCT GCCCAAGAAA CTCAGTCTCA ACAAGTTTGC ACTTTCTTCA 
100
AGAAGCCAAC GAAAAGTAAA AACATAAGAA AAAGAACCAT TGACGCTGAT 
150
GAAGAAGACG GAGATTCGAA AAGCGAAAGC TCTATTCTAC AAAATCTAAA 
200
GAAAGTTGCA AAACCCGATA GCAAGTTATA CTTTTCTTCT GGACCATCTA 
250
AGAGTTCTAC TACAACGAGT GGAGCTCCTG AGAGGTCCGT CTTTCACTAC 
300
GATTCATCCA AGGAAATCCA GGTTCAGAAC GACAGTGGAG CAACAGCAAC 
350
CCTTGAAACT GAGACCGACT TCAATCAAGA CGCACGAGCT ATCCGTGAGA 
400
GAGTTCTTAA AAAAGCAGAC GAAGCATTGA AAGGGAATAA GAAAAAGGCT 
450
TCTGATGAGA AGCTGTACAA AGGAATTCAT GGATATACAG ATCACAAAGC 
500
TGGGTTTAGA AGAGAACAAA CAATCTCGAG CGAGAAAGCT GGAGGCTCAC 
550
ACGGGCCATT AAGAGCTTCT GCTCACATAA GAGTGTCGGC TAGATTCGAT 
600
TACCAGCCAG ACATTTGCAA GGATTACAAA GAAACCGGAT ACTGTGGATA 
650
TGGAGATTCG TGTAAGTTCT TGCATGACCG TGGGGATTAC AAACCAGGAT 
700
GGCAGATAGA GAAAGAGTGG GAAGAAGCAG AGAAAGTTAG GAAGAGAAAT 
750
AAAGCTATGG GAGTTGAGGA TGAAGATGAT GAGGCTGACA AGGATAGCGA 
800
CGAAGACGAA AATGCATTGC CCTTTGCTTG CTTCATTTGC AGGGAGCCTT 
850
TTGTTGATCC AGTTGTCACC AAATGCAAGC ATTACTTCTG TGAGCATTGT 
900
GCTTTAAAGC ATCACACGAA GAACAAGAAG TGCTTTGTGT GTAACCAACC 
950
AACAATGGGG ATTTTCAATG CAGCACATGA GATCAAGAAG AGAATGGCTG 
1000
AAGAACGGAG TAAAGCTGAA CAAGGATTGT GA
1050

>AT1G01350.1 longest ORF length:343
MSDSGEPKPS QQEEPLPQPA AQETQSQQVC TFFKKPTKSK NIRKRTIDAD 
50
EEDGDSKSES SILQNLKKVA KPDSKLYFSS GPSKSSTTTS GAPERSVFHY 
100
DSSKEIQVQN DSGATATLET ETDFNQDARA IRERVLKKAD EALKGNKKKA 
150
SDEKLYKGIH GYTDHKAGFR REQTISSEKA GGSHGPLRAS AHIRVSARFD 
200
YQPDICKDYK ETGYCGYGDS CKFLHDRGDY KPGWQIEKEW EEAEKVRKRN 
250
KAMGVEDEDD EADKDSDEDE NALPFACFIC REPFVDPVVT KCKHYFCEHC 
300
ALKHHTKNKK CFVCNQPTMG IFNAAHEIKK RMAEERSKAE QGL
350