fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G01380 ETC1 ENHANCER OF TRY AND CPC 1, Homeodomain-like superfamily protein (.1)

>AT1G01380.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 235
HindIII A|AGCTT 139


Click here to view TAIR data

>AT1G01380.1 length:252
ATGAATACGC AGCGTAAGTC GAAGCATCTT AAGACCAATC CAACCATTGT 
50
TGCCTCTTCT TCTGAAGAAG TGAGCAGTCT TGAGTGGGAA GAAATAGCAA 
100
TGGCTCAGGA AGAAGAGGAT TTGATTTGCA GGATGTATAA GCTTGTCGGT 
150
GAAAGGTGGG ATTTAATAGC TGGGAGGATT CCAGGAAGAA CAGCAGAAGA 
200
GATTGAGAGG TTTTGGGTGA TGAAGAATCA TCGAAGATCT CAATTACGTT 
250
GA
300

>AT1G01380.1 longest ORF length:83
MNTQRKSKHL KTNPTIVASS SEEVSSLEWE EIAMAQEEED LICRMYKLVG 
50
ERWDLIAGRI PGRTAEEIER FWVMKNHRRS QLR
100