fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G01520 ASG4 ALTERED SEED GERMINATION 4, Homeodomain-like superfamily protein (.1)

>AT1G01520.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, StyI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 135, 750
EcoRV GAT|ATC 840
SpeI A|CTAGT 580
XbaI T|CTAGA 178


Click here to view TAIR data

>AT1G01520.1 length:864
ATGGTGACTG TAAACCCTAG CCAAGCTCAT TGTTTGCCTA TGAAAATGAG 
50
TCTACCGGGT TTCAATACTC TTCCCCACAC GGCAACAACG ATACCGGTTT 
100
CCATACGGAG CAATAGGACG ATGTCGTTTT TTGAGGATCC AACAAAGAAG 
150
GTTAGAAAGC CTTACACTAT CACCAAATCT AGAGAGAACT GGACGGAGCA 
200
AGAACACGAC AAGTTCCTTG AAGCCCTTCA TCTATTTGAC CGGGATTGGA 
250
AGAAAATAAA GGCCTTTGTT GGATCAAAAA CAGTGATACA GATACGAAGC 
300
CACGCACAGA AGTACTTTCT CAAAGTTCAG AAGAATGGGA CTAAAGAACA 
350
TCTCCCACCT CCTCGACCAA AGAGGAAAGC CAATCACCCA TATCCACAAA 
400
AAGCTCCTAA ATTTACTCTT TCTTCTTCAA ACGCATTATT TCAACATGAC 
450
TACTTATACA ACACTAATTC ACATCCGGTG ATTAGCACCA CCCGTAAGCA 
500
TGGATTAGTG CATTGCGATG TTAGTATACC AAGTTCTGTT ATCAAAGAGG 
550
AATTTGGTGT CTCAGAGAAC TGTTGCAGCA CTAGTAGTAG TAGAGATAAG 
600
CAGAGGACTA GAATCGTTAC AGAGACAAAT GACCAAGAAA GTTGTGGAAA 
650
GCCACATAGA GTGGCGCCAA ATTTCGCTGA AGTTTACAAT TTTATAGGAA 
700
GTGTGTTTGA TCCTAAAACA ACAGGTCATG TCAAGAGATT AAAGGAAATG 
750
GATCCAATAA ATCTTGAGAC GGTTCTCTTA CTGATGAAAA ATTTATCTGT 
800
AAACCTGACG AGTCCCGAGT TTGATGAACA ACGGAAGTTG ATATCATCTT 
850
ACAACGCCAG TTAG
900

>AT1G01520.1 longest ORF length:287
MVTVNPSQAH CLPMKMSLPG FNTLPHTATT IPVSIRSNRT MSFFEDPTKK 
50
VRKPYTITKS RENWTEQEHD KFLEALHLFD RDWKKIKAFV GSKTVIQIRS 
100
HAQKYFLKVQ KNGTKEHLPP PRPKRKANHP YPQKAPKFTL SSSNALFQHD 
150
YLYNTNSHPV ISTTRKHGLV HCDVSIPSSV IKEEFGVSEN CCSTSSSRDK 
200
QRTRIVTETN DQESCGKPHR VAPNFAEVYN FIGSVFDPKT TGHVKRLKEM 
250
DPINLETVLL LMKNLSVNLT SPEFDEQRKL ISSYNAS
300