Locus |
Common name |
Short description |
AT1G01520 |
ASG4 |
ALTERED SEED GERMINATION 4, Homeodomain-like superfamily protein (.1) |
>AT1G01520.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, StyI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
135, 750 |
EcoRV
| GAT|ATC |
840 |
SpeI
| A|CTAGT |
580 |
XbaI
| T|CTAGA |
178 |
Click here to view TAIR data
>AT1G01520.1 length:864
ATGGTGACTG TAAACCCTAG CCAAGCTCAT TGTTTGCCTA TGAAAATGAG | 50 |
TCTACCGGGT TTCAATACTC TTCCCCACAC GGCAACAACG ATACCGGTTT | 100 |
CCATACGGAG CAATAGGACG ATGTCGTTTT TTGAGGATCC AACAAAGAAG | 150 |
GTTAGAAAGC CTTACACTAT CACCAAATCT AGAGAGAACT GGACGGAGCA | 200 |
AGAACACGAC AAGTTCCTTG AAGCCCTTCA TCTATTTGAC CGGGATTGGA | 250 |
AGAAAATAAA GGCCTTTGTT GGATCAAAAA CAGTGATACA GATACGAAGC | 300 |
CACGCACAGA AGTACTTTCT CAAAGTTCAG AAGAATGGGA CTAAAGAACA | 350 |
TCTCCCACCT CCTCGACCAA AGAGGAAAGC CAATCACCCA TATCCACAAA | 400 |
AAGCTCCTAA ATTTACTCTT TCTTCTTCAA ACGCATTATT TCAACATGAC | 450 |
TACTTATACA ACACTAATTC ACATCCGGTG ATTAGCACCA CCCGTAAGCA | 500 |
TGGATTAGTG CATTGCGATG TTAGTATACC AAGTTCTGTT ATCAAAGAGG | 550 |
AATTTGGTGT CTCAGAGAAC TGTTGCAGCA CTAGTAGTAG TAGAGATAAG | 600 |
CAGAGGACTA GAATCGTTAC AGAGACAAAT GACCAAGAAA GTTGTGGAAA | 650 |
GCCACATAGA GTGGCGCCAA ATTTCGCTGA AGTTTACAAT TTTATAGGAA | 700 |
GTGTGTTTGA TCCTAAAACA ACAGGTCATG TCAAGAGATT AAAGGAAATG | 750 |
GATCCAATAA ATCTTGAGAC GGTTCTCTTA CTGATGAAAA ATTTATCTGT | 800 |
AAACCTGACG AGTCCCGAGT TTGATGAACA ACGGAAGTTG ATATCATCTT | 850 |
ACAACGCCAG TTAG | 900 |
>AT1G01520.1 longest ORF length:287
MVTVNPSQAH CLPMKMSLPG FNTLPHTATT IPVSIRSNRT MSFFEDPTKK | 50 |
VRKPYTITKS RENWTEQEHD KFLEALHLFD RDWKKIKAFV GSKTVIQIRS | 100 |
HAQKYFLKVQ KNGTKEHLPP PRPKRKANHP YPQKAPKFTL SSSNALFQHD | 150 |
YLYNTNSHPV ISTTRKHGLV HCDVSIPSSV IKEEFGVSEN CCSTSSSRDK | 200 |
QRTRIVTETN DQESCGKPHR VAPNFAEVYN FIGSVFDPKT TGHVKRLKEM | 250 |
DPINLETVLL LMKNLSVNLT SPEFDEQRKL ISSYNAS | 300 |
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