fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G01720 ATAF1, ANAC002 Arabidopsis NAC domain containing protein 2, NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (.1)

>AT1G01720.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 145
StyI C|C[AT][AT]GG 145


Click here to view TAIR data

>AT1G01720.1 length:870
ATGTCAGAAT TATTACAGTT GCCTCCAGGT TTCCGATTTC ACCCTACCGA 
50
TGAAGAGCTT GTCATGCACT ATCTCTGCCG CAAATGTGCC TCTCAGTCCA 
100
TCGCCGTTCC GATCATCGCT GAGATCGATC TCTACAAATA CGATCCATGG 
150
GAGCTTCCTG GTTTAGCCTT GTATGGTGAG AAGGAATGGT ACTTCTTCTC 
200
TCCCAGGGAC AGAAAATATC CCAACGGTTC GCGTCCTAAC CGGTCCGCTG 
250
GTTCTGGTTA CTGGAAAGCT ACCGGAGCTG ATAAACCGAT CGGACTACCT 
300
AAACCGGTCG GAATTAAGAA AGCTCTTGTT TTCTACGCCG GCAAAGCTCC 
350
AAAGGGAGAG AAAACCAATT GGATCATGCA CGAGTACCGT CTCGCCGACG 
400
TTGACCGGTC CGTTCGCAAG AAGAAGAATA GTCTCAGGCT GGATGATTGG 
450
GTTCTCTGCC GGATTTACAA CAAAAAAGGA GCTACCGAGA GGCGGGGACC 
500
ACCGCCTCCG GTTGTTTACG GCGACGAAAT CATGGAGGAG AAGCCGAAGG 
550
TGACGGAGAT GGTTATGCCT CCGCCGCCGC AACAGACAAG TGAGTTCGCG 
600
TATTTCGACA CGTCGGATTC GGTGCCGAAG CTGCATACTA CGGATTCGAG 
650
TTGCTCGGAG CAGGTGGTGT CGCCGGAGTT CACGAGCGAG GTTCAGAGCG 
700
AGCCCAAGTG GAAAGATTGG TCGGCCGTAA GTAATGACAA TAACAATACC 
750
CTTGATTTTG GGTTTAATTA CATTGATGCC ACCGTGGATA ACGCGTTTGG 
800
AGGAGGAGGG AGTAGTAATC AGATGTTTCC GCTACAGGAT ATGTTCATGT 
850
ACATGCAGAA GCCTTACTAG 
900

>AT1G01720.1 longest ORF length:289
MSELLQLPPG FRFHPTDEEL VMHYLCRKCA SQSIAVPIIA EIDLYKYDPW 
50
ELPGLALYGE KEWYFFSPRD RKYPNGSRPN RSAGSGYWKA TGADKPIGLP 
100
KPVGIKKALV FYAGKAPKGE KTNWIMHEYR LADVDRSVRK KKNSLRLDDW 
150
VLCRIYNKKG ATERRGPPPP VVYGDEIMEE KPKVTEMVMP PPPQQTSEFA 
200
YFDTSDSVPK LHTTDSSCSE QVVSPEFTSE VQSEPKWKDW SAVSNDNNNT 
250
LDFGFNYIDA TVDNAFGGGG SSNQMFPLQD MFMYMQKPY
300